RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 PRDM9Q9NQV7 894 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 PRTFDC1Q9NRG1 225 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 KCMF1Q9P0J7 381 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 C19orf25Q9UFG5 118 aaPredicted RBP13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 WBP11Q9Y2W2 641 aaKnown RBP13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 CCL27Q9Y4X3 112 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 USH1CQ9Y6N9 552 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 PEX12O00623 359 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 PROM1O43490 865 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 EDF1O60869 148 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 CNOT3O75175 753 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 DNAJB6O75190 326 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 TGDSO95455 350 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 VIMP08670 466 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 ACPPP15309 386 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 MMP11P24347 488 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 OTX2P32243 289 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 HNRNPH2P55795 449 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 TLE3Q04726 772 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 UGT8Q16880 541 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 CRTC2Q53ET0 693 aaPredicted RBP13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 OR52E8Q6IFG1 317 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 NOXRED1Q6NXP6 359 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 QSOX2Q6ZRP7 698 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 MED25Q71SY5 747 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 CDC26Q8NHZ8 85 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 TANKQ92844 425 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 C3orf30Q96M34 536 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 EBPLQ9BY08 206 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 VN1R1Q9GZP7 353 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 CCDC134Q9H6E4 229 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 RPF2Q9H7B2 306 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 LANCL2Q9NS86 450 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 EIF3LQ9Y262 564 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 ATG4BQ9Y4P1 393 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 POLR3HQ9Y535 204 aaPredicted RBP13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 ASB4Q9Y574 426 aa13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 MRPS18BQ9Y676 258 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-209ENST00000585335 C1orf226A1L170 272 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 CDC14CA4D256 554 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 FAM227AF5H4B4 570 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 CYR61O00622 381 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 EFSO43281 561 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 ALOX12BO75342 701 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 JRKO75564 520 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 JUNP05412 331 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 UMODP07911 640 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 C8orf89P0DMQ9 161 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 TROVE2P10155 538 aaKnown RBP eCLIP13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 PRPS2P11908 318 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 DRD2P14416 443 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 PCSK2P16519 638 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 DDX5P17844 614 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 LBPP18428 481 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 ASMTP46597 345 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 TAS2R50P59544 299 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 RAE1P78406 368 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 STX4Q12846 297 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 ERV3-1Q14264 604 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 HEPACAMQ14CZ8 416 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 NSDHLQ15738 373 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 NDUFAF5Q5TEU4 345 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 ACAD11Q709F0 780 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 IKBIPQ70UQ0 350 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 FAM9CQ8IZT9 166 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 TMEM132CQ8N3T6 1108 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 PLPP5Q8NEB5 264 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 C16orf78Q8WTQ4 265 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 THAP4Q8WY91 577 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 C11orf24Q96F05 449 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 PTCHD1Q96NR3 888 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 CSF3RQ99062 836 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 SIKE1Q9BRV8 207 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 TRIM55Q9BYV6 548 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 NOP53Q9NZM5 478 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 PSME2Q9UL46 239 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
SCAMP4-209ENST00000585335 A0A1W2PR48 441 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 TAF4O00268 1085 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 SDHDO14521 159 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 DIAPH2O60879 1101 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 CTNSO60931 367 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 AIFM1O95831 613 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 PRKAR1AP10644 381 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 ALDH9A1P49189 494 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 ERVK-8P63133 956 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 RHAGQ02094 409 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 EMX2Q04743 252 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 CDC20Q12834 499 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 SRSF6Q13247 344 aaKnown RBP13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 BIKQ13323 160 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 IL10RAQ13651 578 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 SERTAD2Q14140 314 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 KIAA0040Q15053 153 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 RFTN2Q52LD8 501 aaPredicted RBP13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 C6orf136Q5SQH8 315 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 NXNQ6DKJ4 435 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 FAAH2Q6GMR7 532 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 LAPTM4BQ86VI4 370 aa13.72□□□□□ -0.21
SCAMP4-209ENST00000585335 TM4SF18Q96CE8 201 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms