RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 SNX6Q9UNH7 406 aa15.23■□□□□ 0.03
ERBB2-222ENST00000584908 PPIEQ9UNP9 301 aaKnown RBP15.23■□□□□ 0.03
ERBB2-222ENST00000584908 PLLPQ9Y342 182 aa15.23■□□□□ 0.03
ERBB2-222ENST00000584908 SAGE2PA6NJ88 616 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 ENO1P06733 434 aaKnown RBP15.22■□□□□ 0.03
ERBB2-222ENST00000584908 HSD3B1P14060 373 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 CPA3P15088 417 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 HSD3B2P26439 372 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 SLAMF1Q13291 335 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 FRMD7Q6ZUT3 714 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 GPRIN3Q6ZVF9 776 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 IQCKQ8N0W5 287 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 Q8NA96 180 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 C7orf57Q8NEG2 295 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 NFAM1Q8NET5 270 aaPredicted RBP15.22■□□□□ 0.03
ERBB2-222ENST00000584908 ELP5Q8TE02 316 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 RNF32Q9H0A6 362 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 C12orf65Q9H3J6 166 aaKnown RBP15.22■□□□□ 0.03
ERBB2-222ENST00000584908 EPS8L2Q9H6S3 715 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 FARSBQ9NSD9 589 aaKnown RBP15.22■□□□□ 0.03
ERBB2-222ENST00000584908 PHF11Q9UIL8 331 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 MID2Q9UJV3 735 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 ADAM29Q9UKF5 820 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 B3GNT3Q9Y2A9 372 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 SPACA6W5XKT8 324 aa15.22■□□□□ 0.03
ERBB2-222ENST00000584908 SERTM1A2A2V5 107 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 H3BQF6 201 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 EEDO75530 441 aaKnown RBP15.21■□□□□ 0.03
ERBB2-222ENST00000584908 ESRRBO95718 433 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 PDYNP01213 254 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 DEKP35659 375 aaKnown RBP15.21■□□□□ 0.03
ERBB2-222ENST00000584908 IGLV3-21P80748 117 aaPredicted RBP15.21■□□□□ 0.03
ERBB2-222ENST00000584908 TLE1Q04724 770 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 ZNF844Q08AG5 666 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 SLC13A2Q13183 592 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 GPR180Q86V85 440 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 NUDT13Q86X67 352 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 RP1L1Q8IWN7 2480 aaPredicted RBP15.21■□□□□ 0.03
ERBB2-222ENST00000584908 SRRM1Q8IYB3 904 aaKnown RBP15.21■□□□□ 0.03
ERBB2-222ENST00000584908 METTL4Q8N3J2 472 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 SIRT6Q8N6T7 355 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 AGAP11Q8TF27 550 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 MTFMTQ96DP5 389 aaKnown RBP15.21■□□□□ 0.03
ERBB2-222ENST00000584908 LYARQ9NX58 379 aaKnown RBP15.21■□□□□ 0.03
ERBB2-222ENST00000584908 SENP1Q9P0U3 644 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 PTGFRNQ9P2B2 879 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 SHANK1Q9Y566 2161 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 ASB4Q9Y574 426 aa15.21■□□□□ 0.03
ERBB2-222ENST00000584908 J3QKU1 62 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 MANBAO00462 879 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 CDK2AP1O14519 115 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 UBFD1O14562 309 aaKnown RBP15.2■□□□□ 0.02
ERBB2-222ENST00000584908 PROM1O43490 865 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 TMPRSS11DO60235 418 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 KRT6AP02538 564 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 KRT6BP04259 564 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 CPN2P22792 545 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 KRT6CP48668 564 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 GPR143P51810 404 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 NAGLUP54802 743 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 HNRNPH2P55795 449 aaKnown RBP15.2■□□□□ 0.02
ERBB2-222ENST00000584908 TNFRSF17Q02223 184 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 CSTF3Q12996 717 aaKnown RBP15.2■□□□□ 0.02
ERBB2-222ENST00000584908 SERTAD2Q14140 314 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 PCLAFQ15004 111 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 PLEKHN1Q494U1 663 aaPredicted RBP15.2■□□□□ 0.02
ERBB2-222ENST00000584908 LIPMQ5VYY2 423 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 LGI4Q8N135 537 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 ARMC10Q8N2F6 343 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 CCNYL1Q8N7R7 359 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 CDYL2Q8N8U2 506 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 APCDD1LQ8NCL9 501 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 SELENOMQ8WWX9 145 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 HAS2Q92819 552 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 ANKRD9Q96BM1 317 aaPredicted RBP15.2■□□□□ 0.02
ERBB2-222ENST00000584908 MFRPQ9BY79 579 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 PRM3Q9NNZ6 103 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 ADAP2Q9NPF8 381 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 AHSPQ9NZD4 102 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 VTI1BQ9UEU0 232 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 TEKT2Q9UIF3 430 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 FBXW2Q9UKT8 454 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 ATG4BQ9Y4P1 393 aa15.2■□□□□ 0.02
ERBB2-222ENST00000584908 TYROBPO43914 113 aa15.19■□□□□ 0.02
ERBB2-222ENST00000584908 ULK1O75385 1050 aa15.19■□□□□ 0.02
ERBB2-222ENST00000584908 FAM58BPP0C7Q3 252 aa15.19■□□□□ 0.02
ERBB2-222ENST00000584908 TPP2P29144 1249 aaPredicted RBP15.19■□□□□ 0.02
ERBB2-222ENST00000584908 TLX1P31314 330 aaPredicted RBP15.19■□□□□ 0.02
ERBB2-222ENST00000584908 BUD31P41223 144 aaPredicted RBP15.19■□□□□ 0.02
ERBB2-222ENST00000584908 GALNT1Q10472 559 aaPredicted RBP15.19■□□□□ 0.02
ERBB2-222ENST00000584908 TBL3Q12788 808 aaKnown RBP15.19■□□□□ 0.02
ERBB2-222ENST00000584908 BIKQ13323 160 aa15.19■□□□□ 0.02
ERBB2-222ENST00000584908 ELAVL1Q15717 326 aaKnown RBP15.19■□□□□ 0.02
ERBB2-222ENST00000584908 KRT71Q3SY84 523 aa15.19■□□□□ 0.02
ERBB2-222ENST00000584908 TNFAIP8L3Q5GJ75 292 aa15.19■□□□□ 0.02
ERBB2-222ENST00000584908 COLEC12Q5KU26 742 aa15.19■□□□□ 0.02
ERBB2-222ENST00000584908 B3GNTL1Q67FW5 361 aaPredicted RBP15.19■□□□□ 0.02
ERBB2-222ENST00000584908 LINC00696Q6ZRV3 163 aa15.19■□□□□ 0.02
ERBB2-222ENST00000584908 PAGE2Q7Z2X7 111 aa15.19■□□□□ 0.02
ERBB2-222ENST00000584908 GBP7Q8N8V2 638 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms