RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SPEGQ15772 3267 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 CROCCQ5TZA2 2017 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 TEX51A0A1B0GUA7 166 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 A0A1W2PR48 441 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 C1orf226A1L170 272 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 PRMT3O60678 531 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 CCDC22O60826 627 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 DNAJB6O75190 326 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 ALBP02768 609 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 DRD2P14416 443 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 DDX5P17844 614 aaKnown RBP17.28■□□□□ 0.36
RFFL-211ENST00000584541 SPINK2P20155 84 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 HPCAL1P37235 193 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 ALDH9A1P49189 494 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 ATP4BP51164 291 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 CLDN8P56748 225 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 SQLEQ14534 574 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 PTGR1Q14914 329 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 PDCD4Q53EL6 469 aaKnown RBP17.28■□□□□ 0.36
RFFL-211ENST00000584541 MLIPQ5VWP3 458 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 R3HCC1LQ7Z5L2 792 aaKnown RBP17.28■□□□□ 0.36
RFFL-211ENST00000584541 FAM47BQ8NA70 645 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 CLHC1Q8NHS4 586 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 EGLN2Q96KS0 407 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 ZNF578Q96N58 590 aaPredicted RBP17.28■□□□□ 0.36
RFFL-211ENST00000584541 ZBTB18Q99592 522 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 BRINP2Q9C0B6 783 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 CHST8Q9H2A9 424 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 C14orf105Q9NVL8 296 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 TEX10Q9NXF1 929 aaPredicted RBP17.28■□□□□ 0.36
RFFL-211ENST00000584541 ACSL6Q9UKU0 697 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 WASF3Q9UPY6 502 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 GPR45Q9Y5Y3 372 aa17.28■□□□□ 0.36
RFFL-211ENST00000584541 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.27■□□□□ 0.36
RFFL-211ENST00000584541 CLDN4O14493 209 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 RAD1O60671 282 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 LRATO95237 230 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 AIFM1O95831 613 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 FHP07954 510 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 PRPS1L1P21108 318 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 CLNS1AP54105 237 aaKnown RBP17.27■□□□□ 0.36
RFFL-211ENST00000584541 MFSD4BQ5TF39 518 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 C18orf63Q68DL7 685 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 OR52E8Q6IFG1 317 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 FAM71E1Q6IPT2 247 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 ZNF517Q6ZMY9 492 aaPredicted RBP17.27■□□□□ 0.36
RFFL-211ENST00000584541 COX15Q7KZN9 410 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 TIPARPQ7Z3E1 657 aaKnown RBP17.27■□□□□ 0.36
RFFL-211ENST00000584541 ZNF595Q8IYB9 648 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 CACNA2D3Q8IZS8 1091 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.27■□□□□ 0.36
RFFL-211ENST00000584541 MIEF2Q96C03 454 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 CSF3RQ99062 836 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 PRPF18Q99633 342 aaKnown RBP17.27■□□□□ 0.36
RFFL-211ENST00000584541 TGIF2Q9GZN2 237 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 REEP4Q9H6H4 257 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 RPF2Q9H7B2 306 aaKnown RBP17.27■□□□□ 0.36
RFFL-211ENST00000584541 PRDM9Q9NQV7 894 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 SDR39U1Q9NRG7 319 aaPredicted RBP17.27■□□□□ 0.36
RFFL-211ENST00000584541 SLC22A11Q9NSA0 550 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 ZIM2Q9NZV7 527 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 NXT1Q9UKK6 140 aaKnown RBP17.27■□□□□ 0.36
RFFL-211ENST00000584541 PSME2Q9UL46 239 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 PADI2Q9Y2J8 665 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 PCDHA9Q9Y5H5 950 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 COPG1Q9Y678 874 aaKnown RBP17.27■□□□□ 0.36
RFFL-211ENST00000584541 SEC16AO15027 2179 aa17.27■□□□□ 0.36
RFFL-211ENST00000584541 IGLV3-12A0A075B6K2 115 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 CYR61O00622 381 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 AKAP10O43572 662 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 DCTN3O75935 186 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 BMP10O95393 424 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 ADRB1P08588 477 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 DDCP20711 480 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 PPP2R1BP30154 601 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 MRPL19P49406 292 aaKnown RBP17.26■□□□□ 0.35
RFFL-211ENST00000584541 NME5P56597 212 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 ACTN3Q08043 901 aaPredicted RBP17.26■□□□□ 0.35
RFFL-211ENST00000584541 FAM199XQ6PEV8 388 aaPredicted RBP17.26■□□□□ 0.35
RFFL-211ENST00000584541 CLNKQ7Z7G1 428 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 ZC3H7AQ8IWR0 971 aaKnown RBP17.26■□□□□ 0.35
RFFL-211ENST00000584541 STT3BQ8TCJ2 826 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 TANKQ92844 425 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 GFM2Q969S9 779 aaKnown RBP17.26■□□□□ 0.35
RFFL-211ENST00000584541 MTERF3Q96E29 417 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 RBCK1Q9BYM8 510 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 SLC26A1Q9H2B4 701 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 WDR54Q9H977 334 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 EHD3Q9NZN3 535 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 CTSFQ9UBX1 484 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 CCDC88CQ9P219 2028 aa17.26■□□□□ 0.35
RFFL-211ENST00000584541 FAM227AF5H4B4 570 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 B4GALT2O60909 372 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 SLC22A3O75751 556 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 RAB40ALP0C0E4 278 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 ZGLP1P0C6A0 271 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 LIPCP11150 499 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 COX7A2P14406 83 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 TCN2P20062 427 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 C21orf58P58505 322 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms