RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 WDR55Q9H6Y2 383 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 AKTIPQ9H8T0 292 aa15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 LRTM1Q9HBL6 345 aa15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 ANKHQ9HCJ1 492 aa15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 C1orf109Q9NX04 203 aa15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 SIRT5Q9NXA8 310 aa15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 CTSFQ9UBX1 484 aa15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 ZNF282Q9UDV7 671 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 NAALAD2Q9Y3Q0 740 aa15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 MAP4K5Q9Y4K4 846 aa15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 MAU2Q9Y6X3 613 aa15.09■□□□□ 0.01
CSNK1D-223ENST00000584472 A0A0A6YYC8 382 aaPredicted RBP15.08■□□□□ 0
CSNK1D-223ENST00000584472 I3L1I5 382 aaPredicted RBP15.08■□□□□ 0
CSNK1D-223ENST00000584472 SHOX2O60902 331 aaPredicted RBP15.08■□□□□ 0
CSNK1D-223ENST00000584472 PEX11AO75192 247 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 VPS4BO75351 444 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 KLHL18O94889 574 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 SCELO95171 688 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 FAM87AP0C7U9 286 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 TROVE2P10155 538 aaKnown RBP eCLIP15.08■□□□□ 0
CSNK1D-223ENST00000584472 HIST1H1TP22492 207 aaPredicted RBP15.08■□□□□ 0
CSNK1D-223ENST00000584472 EPHA3P29320 983 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 SSR2P43308 183 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 BTN3A2P78410 334 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 OCA2Q04671 838 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 SSPNQ14714 243 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 AP5B1Q2VPB7 878 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 DEFB109BQ30KR1 87 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 GALNTL6Q49A17 601 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 ATP6AP1LQ52LC2 224 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 C6orf136Q5SQH8 315 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 ZNF793Q6ZN11 406 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 LARP4Q71RC2 724 aaKnown RBP eCLIP15.08■□□□□ 0
CSNK1D-223ENST00000584472 COMMD6Q7Z4G1 85 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 NUDT13Q86X67 352 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 C1orf52Q8N6N3 182 aaKnown RBP15.08■□□□□ 0
CSNK1D-223ENST00000584472 AMER3Q8N944 861 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 OR9A4Q8NGU2 314 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 APOBEC4Q8WW27 367 aaKnown RBP15.08■□□□□ 0
CSNK1D-223ENST00000584472 SPSB2Q99619 263 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 ROGDIQ9GZN7 287 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 DDX31Q9H8H2 851 aaKnown RBP15.08■□□□□ 0
CSNK1D-223ENST00000584472 KCNK13Q9HB14 408 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 MKKSQ9NPJ1 570 aaPredicted RBP15.08■□□□□ 0
CSNK1D-223ENST00000584472 C14orf105Q9NVL8 296 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 TRPC4Q9UBN4 977 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 GIMAP2Q9UG22 337 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 MAN2B2Q9Y2E5 1009 aa15.08■□□□□ 0
CSNK1D-223ENST00000584472 PRRC2CQ9Y520 2896 aaKnown RBP15.08■□□□□ 0
CSNK1D-223ENST00000584472 CCDC88CQ9P219 2028 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 A0A088AWK7 358 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 GOLGA8QA0A0J9YX86 632 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 GOLGA8OA6NCC3 632 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 GOLGA8NF8WBI6 632 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 SGK494L7N484 410 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 DIAPH2O60879 1101 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 SEC22BO75396 215 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 UMODP07911 640 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 ZNF10P21506 573 aaPredicted RBP15.07■□□□□ 0
CSNK1D-223ENST00000584472 DRD4P21917 467 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 ATP5A1P25705 553 aaKnown RBP15.07■□□□□ 0
CSNK1D-223ENST00000584472 CERS1P27544 350 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 IDH3AP50213 366 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 MTTPP55157 894 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 POLE2P56282 527 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 RAE1P78406 368 aaKnown RBP15.07■□□□□ 0
CSNK1D-223ENST00000584472 ACSM2AQ08AH3 577 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 RFTN2Q52LD8 501 aaPredicted RBP15.07■□□□□ 0
CSNK1D-223ENST00000584472 FAM69BQ5VUD6 431 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 ACSM2BQ68CK6 577 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 GALNT18Q6P9A2 607 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 PAGE2Q7Z2X7 111 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 MRGPREQ86SM8 312 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 APLFQ8IW19 511 aaPredicted RBP15.07■□□□□ 0
CSNK1D-223ENST00000584472 ZCCHC7Q8N3Z6 543 aaKnown RBP15.07■□□□□ 0
CSNK1D-223ENST00000584472 ACOT4Q8N9L9 421 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 STT3BQ8TCJ2 826 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 STON2Q8WXE9 905 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 FCRL1Q96LA6 429 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 OR52B2Q96RD2 323 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 SERINC2Q96SA4 455 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 EBF4Q9BQW3 602 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 TGIF2Q9GZN2 237 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 NSRP1Q9H0G5 558 aaKnown RBP15.07■□□□□ 0
CSNK1D-223ENST00000584472 COPS7BQ9H9Q2 264 aaPredicted RBP15.07■□□□□ 0
CSNK1D-223ENST00000584472 DCTN4Q9UJW0 460 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 ADAM29Q9UKF5 820 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 HEMK1Q9Y5R4 338 aaPredicted RBP15.07■□□□□ 0
CSNK1D-223ENST00000584472 KCNMB2Q9Y691 235 aa15.07■□□□□ 0
CSNK1D-223ENST00000584472 FLNBO75369 2602 aaKnown RBP15.06■□□□□ 0
CSNK1D-223ENST00000584472 UBR5O95071 2799 aaPredicted RBP15.06■□□□□ 0
CSNK1D-223ENST00000584472 A0A0A6YYD5 115 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 ZNF860A6NHJ4 632 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 SUV39H1O43463 412 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 EEDO75530 441 aaKnown RBP15.06■□□□□ 0
CSNK1D-223ENST00000584472 IGHEP01854 428 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 GBAP04062 536 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 KLK1P06870 262 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 ZGLP1P0C6A0 271 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms