RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 MYOCOSA0A1B0GUC4 107 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 PLPP1O14494 284 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 SEMA7AO75326 666 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 SCELO95171 688 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 EDN3P14138 238 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 CLCN2P51788 898 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 NEK2P51955 445 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 TERF2Q15554 542 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 OR1C1Q15619 314 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 TTC19Q6DKK2 380 aaPredicted RBP19.08■□□□□ 0.64
SS18-224ENST00000584083 OR52B6Q8NGF0 335 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 MTFMTQ96DP5 389 aaKnown RBP19.08■□□□□ 0.64
SS18-224ENST00000584083 NSUN5Q96P11 429 aaKnown RBP19.08■□□□□ 0.64
SS18-224ENST00000584083 SIGLEC12Q96PQ1 595 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 TAAR6Q96RI8 345 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 ALOXE3Q9BYJ1 711 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 L2HGDHQ9H9P8 463 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 SEMA4BQ9NPR2 832 aaPredicted RBP19.08■□□□□ 0.64
SS18-224ENST00000584083 KLHL1Q9NR64 748 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 PSMC3IPQ9P2W1 217 aaPredicted RBP19.08■□□□□ 0.64
SS18-224ENST00000584083 CLDN16Q9Y5I7 305 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 CLCA3PQ9Y6N3 262 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 HECTD1Q9ULT8 2610 aa19.08■□□□□ 0.64
SS18-224ENST00000584083 BLACEA4D250 179 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 SYNDIG1LA6NDD5 238 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 LDB3O75112 727 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 CD46P15529 392 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 TNNI3P19429 210 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 TPP2P29144 1249 aaPredicted RBP19.07■□□□□ 0.64
SS18-224ENST00000584083 ELAVL1Q15717 326 aaKnown RBP19.07■□□□□ 0.64
SS18-224ENST00000584083 TMEM132CQ8N3T6 1108 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 HORMAD2Q8N7B1 307 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 EIF1ADQ8N9N8 165 aaKnown RBP19.07■□□□□ 0.64
SS18-224ENST00000584083 THAP3Q8WTV1 239 aaPredicted RBP19.07■□□□□ 0.64
SS18-224ENST00000584083 VMP1Q96GC9 406 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 C5orf34Q96MH7 638 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 EPB41L4BQ9H329 900 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 TMEM216Q9P0N5 145 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 FETUBQ9UGM5 382 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 TBK1Q9UHD2 729 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 PHF11Q9UIL8 331 aa19.07■□□□□ 0.64
SS18-224ENST00000584083 USP9XQ93008 2570 aaPredicted RBP19.07■□□□□ 0.64
SS18-224ENST00000584083 A8MT66 165 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 GOLGA8RI6L899 631 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 FOXE1O00358 373 aaPredicted RBP19.06■□□□□ 0.64
SS18-224ENST00000584083 FCHO1O14526 889 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 CRYABP02511 175 aaKnown RBP19.06■□□□□ 0.64
SS18-224ENST00000584083 TAC1P20366 129 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 MLF1P58340 268 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 ID2Q02363 134 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 CUL3Q13618 768 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 SERTAD2Q14140 314 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 SPINK14Q6IE38 97 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 RPS27LQ71UM5 84 aaKnown RBP19.06■□□□□ 0.64
SS18-224ENST00000584083 MILR1Q7Z6M3 343 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 GPR180Q86V85 440 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 APCDD1LQ8NCL9 501 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 MDS2Q8NDY4 140 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 WDR20Q8TBZ3 569 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 UBLCP1Q8WVY7 318 aaPredicted RBP19.06■□□□□ 0.64
SS18-224ENST00000584083 NR4A3Q92570 626 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 NCLNQ969V3 563 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 SLX1AQ9BQ83 275 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 NTMT1Q9BV86 223 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 ZBTB26Q9HCK0 441 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 MS4A12Q9NXJ0 267 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 LRFN1Q9P244 771 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 VTI1BQ9UEU0 232 aa19.06■□□□□ 0.64
SS18-224ENST00000584083 RPS17P08708 135 aaKnown RBP19.05■□□□□ 0.64
SS18-224ENST00000584083 SBK3P0C264 359 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 TSPAN8P19075 237 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 TLX1P31314 330 aaPredicted RBP19.05■□□□□ 0.64
SS18-224ENST00000584083 ARFIP1P53367 373 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 CDH13P55290 713 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 PMP22Q01453 160 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 IFT88Q13099 833 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 TRAF3Q13114 568 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 SGO1Q5FBB7 561 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 FRG2Q64ET8 278 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 CYP20A1Q6UW02 462 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 LCA5Q86VQ0 697 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 ZCCHC7Q8N3Z6 543 aaKnown RBP19.05■□□□□ 0.64
SS18-224ENST00000584083 TMEM151AQ8N4L1 468 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 OR4F6Q8NGB9 312 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 DNAJB8Q8NHS0 232 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 ACMSDQ8TDX5 336 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 ZNF483Q8TF39 744 aaPredicted RBP19.05■□□□□ 0.64
SS18-224ENST00000584083 SSC4DQ8WTU2 575 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 DAZLQ92904 295 aaKnown RBP19.05■□□□□ 0.64
SS18-224ENST00000584083 FRG2BQ96QU4 278 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 SERPINI1Q99574 410 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 HES7Q9BYE0 225 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 PSD3Q9NYI0 1048 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 PPIEQ9UNP9 301 aaKnown RBP19.05■□□□□ 0.64
SS18-224ENST00000584083 PCDHGB6Q9Y5F9 930 aa19.05■□□□□ 0.64
SS18-224ENST00000584083 CDK2AP1O14519 115 aa19.04■□□□□ 0.64
SS18-224ENST00000584083 EEDO75530 441 aaKnown RBP19.04■□□□□ 0.64
SS18-224ENST00000584083 ZFAND5O76080 213 aa19.04■□□□□ 0.64
SS18-224ENST00000584083 ETHE1O95571 254 aa19.04■□□□□ 0.64
SS18-224ENST00000584083 OTCP00480 354 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms