RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 PCBP2Q15366 365 aaKnown RBP eCLIP14.66□□□□□ -0.063e-12■■■■■ 44.1
SKA2-209ENST00000583976 NSDHLQ15738 373 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 EXT1Q16394 746 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 MEP1AQ16819 746 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 CCDC153Q494R4 210 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 XKR6Q5GH73 641 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 PRAMEF9Q5VWM5 478 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 C3P1Q6ZMU1 363 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 SLCO4C1Q6ZQN7 724 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 RPS27LQ71UM5 84 aaKnown RBP14.66□□□□□ -0.06
SKA2-209ENST00000583976 CHERPQ8IWX8 916 aaKnown RBP14.66□□□□□ -0.06
SKA2-209ENST00000583976 MFSD9Q8NBP5 474 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 OR4K1Q8NGD4 311 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 SLC13A3Q8WWT9 602 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 APOPT1Q96IL0 206 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 AIF1LQ9BQI0 150 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 IQCGQ9H095 443 aaKnown RBP14.66□□□□□ -0.06
SKA2-209ENST00000583976 PELI2Q9HAT8 420 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 TMCO1Q9UM00 188 aa14.66□□□□□ -0.06
SKA2-209ENST00000583976 STX16-NPEPL1H3BU86 382 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 STX16O14662 325 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 PLIN3O60664 434 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 SERPIND1P05546 499 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 MYZAPP0CAP1 466 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 ATP5F1P24539 256 aaPredicted RBP14.65□□□□□ -0.06
SKA2-209ENST00000583976 CASP6P55212 293 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 KRTAP10-9P60411 292 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 REEP5Q00765 189 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 IRF8Q02556 426 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 CHIT1Q13231 466 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 GTF2H2Q13888 395 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 DOC2AQ14183 400 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 SLBPQ14493 270 aaKnown RBP eCLIP14.65□□□□□ -0.06
SKA2-209ENST00000583976 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.65□□□□□ -0.06
SKA2-209ENST00000583976 DEFB134Q4QY38 66 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 RNFT1Q5M7Z0 435 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 GTF2H2CQ6P1K8 395 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 MTFR2Q6P444 385 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 GOLGA7Q7Z5G4 137 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 FGD2Q7Z6J4 655 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.65□□□□□ -0.06
SKA2-209ENST00000583976 CROCCP2Q86T23 111 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 EXOC3L1Q86VI1 746 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 ZNF295-AS1Q8N0V1 137 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 AFAP1L2Q8N4X5 818 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 SLC5A8Q8N695 610 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 ARMC2Q8NEN0 867 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 M1APQ8TC57 530 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 ADAMTS18Q8TE60 1221 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 THAP3Q8WTV1 239 aaPredicted RBP14.65□□□□□ -0.06
SKA2-209ENST00000583976 THAP11Q96EK4 314 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 NSUN5Q96P11 429 aaKnown RBP14.65□□□□□ -0.06
SKA2-209ENST00000583976 LPAR4Q99677 370 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 IPPKQ9H8X2 491 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 PRM3Q9NNZ6 103 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 SLC17A7Q9P2U7 560 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 ZNF835Q9Y2P0 537 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 MEMO1Q9Y316 297 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 HIVEP1P15822 2718 aa14.65□□□□□ -0.06
SKA2-209ENST00000583976 TRBC2A0A5B9 178 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 MAGEB17A8MXT2 336 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 C4orf51C9J302 202 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 G3V2L1 256 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 GALR3O60755 368 aaPredicted RBP14.64□□□□□ -0.07
SKA2-209ENST00000583976 FHP07954 510 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 ZNF888P0CJ79 500 aaPredicted RBP14.64□□□□□ -0.07
SKA2-209ENST00000583976 MYL2P10916 166 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 ESRRAP11474 423 aaPredicted RBP14.64□□□□□ -0.07
SKA2-209ENST00000583976 CD46P15529 392 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 TSPAN8P19075 237 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 TPP2P29144 1249 aaPredicted RBP14.64□□□□□ -0.07
SKA2-209ENST00000583976 ARL1P40616 181 aaPredicted RBP14.64□□□□□ -0.07
SKA2-209ENST00000583976 KIR3DL1P43629 444 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 CDH13P55290 713 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 OR4D2P58180 307 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 ZYG11AQ6WRX3 759 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 Q6ZPB1 254 aaPredicted RBP14.64□□□□□ -0.07
SKA2-209ENST00000583976 ZNF227Q86WZ6 799 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 MYLK4Q86YV6 388 aaPredicted RBP14.64□□□□□ -0.07
SKA2-209ENST00000583976 SPPL2CQ8IUH8 684 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 TBC1D19Q8N5T2 526 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 CPSF7Q8N684 471 aaKnown RBP14.64□□□□□ -0.07
SKA2-209ENST00000583976 ANKRD53Q8N9V6 530 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 TCP10LQ8TDR4 215 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 AGAP11Q8TF27 550 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 ATP6V1E2Q96A05 226 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 OR1F2PQ96R84 312 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 CDCP1Q9H5V8 836 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 RUBCNLQ9H714 662 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 NOL11Q9H8H0 719 aaKnown RBP14.64□□□□□ -0.07
SKA2-209ENST00000583976 CHST11Q9NPF2 352 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 LRFN1Q9P244 771 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 PCTPQ9UKL6 214 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 PLLPQ9Y342 182 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 PCDHGB6Q9Y5F9 930 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 SLC22A7Q9Y694 548 aa14.64□□□□□ -0.07
SKA2-209ENST00000583976 UQCRHLA0A096LP55 91 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 GOLGA6L10A6NI86 522 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 B4GALT2O60909 372 aa14.63□□□□□ -0.07
SKA2-209ENST00000583976 SLC25A12O75746 678 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms