RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 OR6B1O95007 311 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 WISP3O95389 354 aaPredicted RBP9.83□□□□□ -0.84
RFFL-209ENST00000581265 IGHG3P01860 377 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 IFNA16P05015 189 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 HOXD4P09016 255 aaPredicted RBP9.83□□□□□ -0.84
RFFL-209ENST00000581265 CNR1P21554 472 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 MSX1P28360 303 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 SOX3P41225 446 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 HK2P52789 917 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 DR1Q01658 176 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 POU4F1Q01851 419 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 PDIA2Q13087 525 aaKnown RBP9.83□□□□□ -0.84
RFFL-209ENST00000581265 HYAL4Q2M3T9 481 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 NDUFAF5Q5TEU4 345 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 IL20RBQ6UXL0 311 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 FRA10AC1Q70Z53 315 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 SLC22A16Q86VW1 577 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 TGIF2LYQ8IUE0 185 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 ANKMY2Q8IV38 441 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 DMRTC2Q8IXT2 367 aaPredicted RBP9.83□□□□□ -0.84
RFFL-209ENST00000581265 RPRMLQ8N4K4 120 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 FAM47BQ8NA70 645 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 FBXO36Q8NEA4 188 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 OR14A16Q8NHC5 309 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 RUNDC3BQ96NL0 473 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 CSF3RQ99062 836 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 TTTY12Q9BZ98 90 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 CNOT10Q9H9A5 744 aaKnown RBP9.83□□□□□ -0.84
RFFL-209ENST00000581265 LYRM4Q9HD34 91 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 DNAJC11Q9NVH1 559 aa9.83□□□□□ -0.84
RFFL-209ENST00000581265 HCFC1P51610 2035 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 A0A1B0GVC2 190 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 NKX2-6A6NCS4 301 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 NCF1BA6NI72 391 aaPredicted RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 NCF1CA8MVU1 366 aaPredicted RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 NPIPA2E9PIF3 369 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 NPIPA3F8WFD2 350 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 WWP2O00308 870 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 BCKDKO14874 412 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 CLGNO14967 610 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 ZSCAN12O43309 604 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 STK16O75716 305 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 NCF1P14598 390 aaPredicted RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 KLK2P20151 261 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 ACVR2AP27037 513 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 CERS1P27544 350 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 CASP2P42575 452 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 KCNC1P48547 511 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 SLC12A2P55011 1212 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 NUP107P57740 925 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 RNF4P78317 190 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 PLGLB1Q02325 96 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 TGM3Q08188 693 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 FOXO1Q12778 655 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 STX4Q12846 297 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 LAPTM5Q13571 262 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 SERTAD2Q14140 314 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 DOC2AQ14183 400 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 E2F2Q14209 437 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 FASTKD3Q14CZ7 662 aaKnown RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 TBCCQ15814 346 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 ZNF750Q32MQ0 723 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 SULT1C3Q6IMI6 304 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 ADNP2Q6IQ32 1131 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 RTL4Q6ZR62 310 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 GK5Q6ZS86 529 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 UBE3DQ7Z6J8 389 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 CLNKQ7Z7G1 428 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 GPSM1Q86YR5 675 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 CREG2Q8IUH2 290 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 CCDC71Q8IV32 467 aaPredicted RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 KLHL7Q8IXQ5 586 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 SPATA6LQ8N4H0 392 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 GOLM1Q8NBJ4 401 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 SRFBP1Q8NEF9 429 aaKnown RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 C7orf57Q8NEG2 295 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 OR5L2Q8NGL0 311 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 PTCD3Q96EY7 689 aaKnown RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 SCYL1Q96KG9 808 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 CAPZA3Q96KX2 299 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 KCNC2Q96PR1 638 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 F2RL3Q96RI0 385 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 FAM173AQ9BQD7 235 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 TMEM79Q9BSE2 394 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 TBCDQ9BTW9 1192 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 EFCAB11Q9BUY7 163 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 OR8D2Q9GZM6 311 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 ROGDIQ9GZN7 287 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 GSX1Q9H4S2 264 aaPredicted RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 COPS7BQ9H9Q2 264 aaPredicted RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 IL1RL2Q9HB29 575 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 SLC24A3Q9HC58 644 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 PNPLA3Q9NST1 481 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 KCNN3Q9UGI6 736 aa9.82□□□□□ -0.84
RFFL-209ENST00000581265 MTO1Q9Y2Z2 717 aaKnown RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 PHF3Q92576 2039 aaKnown RBP9.82□□□□□ -0.84
RFFL-209ENST00000581265 ANKHD1Q8IWZ3 2542 aaKnown RBP9.81□□□□□ -0.84
RFFL-209ENST00000581265 A0A0G2JMM0 328 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 A0A1W2PPB8 328 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 A0A1W2PRS3 328 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms