RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 LRRC43Q8N309 656 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 ZNF614Q8N883 585 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 OR6C4Q8NGE1 309 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 OR10G8Q8NGN5 311 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 OR1L3Q8NH93 324 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 KIF18AQ8NI77 898 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 KIAA1524Q8TCG1 905 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 C10orf90Q96M02 699 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 GDAP1L1Q96MZ0 367 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 RBM14Q96PK6 669 aaKnown RBP3.83□□□□□ -1.8
NF1-220ENST00000581113 PIGQQ9BRB3 760 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 GTPBP2Q9BX10 602 aaKnown RBP3.83□□□□□ -1.8
NF1-220ENST00000581113 TEX13AQ9BXU3 409 aaPredicted RBP3.83□□□□□ -1.8
NF1-220ENST00000581113 FZD8Q9H461 694 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 GSN-AS1Q9NRJ2 163 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 HOMER3Q9NSC5 361 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 ZDHHC18Q9NUE0 388 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 AIPL1Q9NZN9 384 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 POLLQ9UGP5 575 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 PPP1R3CQ9UQK1 317 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 LIPGQ9Y5X9 500 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 V9GYY5 206 aaPredicted RBP3.83□□□□□ -1.8
NF1-220ENST00000581113 C4AP0C0L4 1744 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 TJP1Q07157 1748 aa3.83□□□□□ -1.8
NF1-220ENST00000581113 SCN11AQ9UI33 1791 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 HEG1Q9ULI3 1381 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 ADAMTS7Q9UKP4 1686 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 MYH14Q7Z406 1995 aaKnown RBP3.82□□□□□ -1.8
NF1-220ENST00000581113 CLRN2A0PK11 232 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 ARHGEF37A1IGU5 675 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 SNURFLB1AK76 121 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 O00370 1275 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 ZNF263O14978 683 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 PGRMC2O15173 223 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 NOL3O60936 208 aaKnown RBP3.82□□□□□ -1.8
NF1-220ENST00000581113 PALMO75781 387 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 ATP6AP2O75787 350 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 RECQL5O94762 991 aaPredicted RBP3.82□□□□□ -1.8
NF1-220ENST00000581113 NXPH2O95156 264 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 SEC24AO95486 1093 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 PTBP3O95758 552 aaKnown RBP3.82□□□□□ -1.8
NF1-220ENST00000581113 PAHP00439 452 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 PNPP00491 289 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 FDPSP14324 419 aaKnown RBP3.82□□□□□ -1.8
NF1-220ENST00000581113 CCNCP24863 283 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 PTAFRP25105 342 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 VEGFCP49767 419 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 DNA2P51530 1060 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 GSDMDP57764 484 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 TRA2BP62995 288 aaKnown RBP3.82□□□□□ -1.8
NF1-220ENST00000581113 HLA-BQ31612 363 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 GLRA4Q5JXX5 417 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 SLC25A24Q6NUK1 477 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 TMEM270Q6UE05 265 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 ADCK2Q7Z695 626 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 SIX6OS1Q8N1H7 587 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 DRAXINQ8NBI3 349 aaPredicted RBP3.82□□□□□ -1.8
NF1-220ENST00000581113 SLC37A3Q8NCC5 494 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 GMCL1P1Q8NEA9 526 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 MNS1Q8NEH6 495 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 OR7A2PQ8NGA2 310 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 APOBEC4Q8WW27 367 aaKnown RBP3.82□□□□□ -1.8
NF1-220ENST00000581113 PRCCQ92733 491 aaPredicted RBP3.82□□□□□ -1.8
NF1-220ENST00000581113 POM121L2Q96KW2 1035 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 RMDN2Q96LZ7 410 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 LINC00479Q96M42 142 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 SPATA33Q96N06 139 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 ZNF599Q96NL3 588 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 KATNB1Q9BVA0 655 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 DGCR6LQ9BY27 220 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 RWDD1Q9H446 243 aaPredicted RBP3.82□□□□□ -1.8
NF1-220ENST00000581113 FN3KQ9H479 309 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 MAN2C1Q9NTJ4 1040 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 ANO10Q9NW15 660 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 KIF13BQ9NQT8 1826 aa3.82□□□□□ -1.8
NF1-220ENST00000581113 TRAV24A0A0B4J272 114 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 SYCE3A1L190 88 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 ZFAND5O76080 213 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 RPA1P27694 616 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 HSD17B3P37058 310 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 CASP9P55211 416 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 ACTR1AP61163 376 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 DLK1P80370 383 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 MYL7Q01449 175 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 ILF2Q12905 390 aaKnown RBP3.81□□□□□ -1.8
NF1-220ENST00000581113 TRA2AQ13595 282 aaKnown RBP eCLIP3.81□□□□□ -1.8
NF1-220ENST00000581113 PTK6Q13882 451 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 EXT1Q16394 746 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 LACTB2Q53H82 288 aaPredicted RBP3.81□□□□□ -1.8
NF1-220ENST00000581113 TOR1AIP1Q5JTV8 583 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 BSPRYQ5W0U4 402 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 ENPP7Q6UWV6 458 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 GBP6Q6ZN66 633 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 ERN2Q76MJ5 926 aaKnown RBP3.81□□□□□ -1.8
NF1-220ENST00000581113 RUFY3Q7L099 469 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 IQUBQ8NA54 791 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 CCDC148Q8NFR7 591 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 OR6S1Q8NH40 331 aa3.81□□□□□ -1.8
NF1-220ENST00000581113 AGR3Q8TD06 166 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms