RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ZNF441Q8N8Z8 693 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 MFSD9Q8NBP5 474 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 TMEM52Q8NDY8 209 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 ACTL9Q8TC94 416 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 SLC22A8Q8TCC7 542 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 UTP15Q8TED0 518 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 CTNNBL1Q8WYA6 563 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 ANKRD9Q96BM1 317 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 BIRC8Q96P09 236 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 SLC30A3Q99726 388 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 FERMT1Q9BQL6 677 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 SFXN3Q9BWM7 321 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 HEMGNQ9BXL5 484 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 BEX2Q9BXY8 128 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 ANGPTL4Q9BY76 406 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 RHBGQ9H310 441 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 CXorf56Q9H5V9 222 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 CALHM2Q9HA72 323 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 TMEM160Q9NX00 188 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 CAMK2AQ9UQM7 478 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 SLC6A5Q9Y345 797 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 ROS1P08922 2347 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 MED12Q93074 2177 aa7.01□□□□□ -1.29
SMARCE1-217ENST00000580654 TNFSF12-TNFSF13A0A0A6YY99 330 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF839A8K0R7 811 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 OVOL3O00110 214 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 NDUFS4O43181 175 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 CEP104O60308 925 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 TNFSF13O75888 250 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 RCBTB2O95199 551 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 LRATO95237 230 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 CATP04040 527 aaKnown RBP7□□□□□ -1.29
SMARCE1-217ENST00000580654 THBS1P07996 1170 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 SLC35G6P0C7Q6 338 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 SMIM10L1P0DMW3 83 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 RBP3P10745 1247 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 RNH1P13489 461 aaKnown RBP7□□□□□ -1.29
SMARCE1-217ENST00000580654 HRH2P25021 359 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 CTNNA2P26232 953 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 CPOXP36551 454 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 ACVR1BP36896 505 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 SKIV2L2P42285 1042 aaKnown RBP7□□□□□ -1.29
SMARCE1-217ENST00000580654 P3H1Q32P28 736 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 NHSL2Q5HYW2 709 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 HSDL2Q6YN16 418 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF662Q6ZS27 426 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF550Q7Z398 422 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 CDKL3Q8IVW4 592 aaPredicted RBP7□□□□□ -1.29
SMARCE1-217ENST00000580654 PM20D2Q8IYS1 436 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 ARIH2OSQ8N7S6 290 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 OR52K1Q8NGK4 314 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 PAQR8Q8TEZ7 354 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 SMIM10Q96HG1 83 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 UGT2B28Q9BY64 529 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 AICDAQ9GZX7 198 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 SLCO5A1Q9H2Y9 848 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 LRRC40Q9H9A6 602 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 L2HGDHQ9H9P8 463 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 CATSPERZQ9NTU4 200 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 PSD3Q9NYI0 1048 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF226Q9NYT6 803 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 RIMKLBQ9ULI2 386 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 BOKQ9UMX3 212 aaPredicted RBP7□□□□□ -1.29
SMARCE1-217ENST00000580654 MMACHCQ9Y4U1 282 aa7□□□□□ -1.29
SMARCE1-217ENST00000580654 A0A1B0GTH6 734 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 MYOCOSA0A1B0GUC4 107 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 POM121CA8CG34 1229 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 CD3EAPO15446 510 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 TMCC2O75069 709 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ADAM11O75078 769 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 TRIM3O75382 744 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ACSL3O95573 720 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 SYF2O95926 243 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 C1QAP02745 245 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 CDH1P12830 882 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 GDF1P27539 372 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 IDUAP35475 653 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 GRIA1P42261 906 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 PCYT1AP49585 367 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 TTPAP49638 278 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 EIF3EP60228 445 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 RAB8AP61006 207 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 TBPL1P62380 186 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 KCNJ2P63252 427 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 RNF4P78317 190 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 PWP1Q13610 501 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 PARP6Q2NL67 630 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ASTE1Q2TB18 679 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 SLC22A10Q63ZE4 541 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF474Q6S9Z5 364 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 OPN5Q6U736 354 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF704Q6ZNC4 412 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 RBM43Q6ZSC3 357 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ADGRE4PQ86SQ3 457 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 MEX3DQ86XN8 651 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 REXO1L1PQ8IX06 675 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 KATNAL2Q8IYT4 538 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 GCNT2Q8N0V5 402 aa6.99□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF611Q8N823 705 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms