RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 TMEM45AQ9NWC5 275 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 KCMF1Q9P0J7 381 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 HCN3Q9P1Z3 774 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 DLGAP4Q9Y2H0 992 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 ASB4Q9Y574 426 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 C4orf51C9J302 202 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 TMPRSS11DO60235 418 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 SNX3O60493 162 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 CCDC22O60826 627 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 BMP10O95393 424 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 B3GALT4O96024 378 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 IGHEP01854 428 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 ZGLP1P0C6A0 271 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 NR2F6P10588 404 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 NCF2P19878 526 aaPredicted RBP13.48□□□□□ -0.25
SKA2-205ENST00000580541 HPCAL1P37235 193 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 CLNS1AP54105 237 aaKnown RBP13.48□□□□□ -0.25
SKA2-205ENST00000580541 HSD17B7P56937 341 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 PCBP4P57723 403 aaKnown RBP13.48□□□□□ -0.25
SKA2-205ENST00000580541 OLR1P78380 273 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 TNFRSF17Q02223 184 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 KLC1Q07866 573 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 ACTN3Q08043 901 aaPredicted RBP13.48□□□□□ -0.25
SKA2-205ENST00000580541 NDUFAF5Q5TEU4 345 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 MFSD4BQ5TF39 518 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 ANKS4BQ8N8V4 417 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 OR5T3Q8NGG3 340 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 STT3BQ8TCJ2 826 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 OR52B2Q96RD2 323 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 MAPKAP1Q9BPZ7 522 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 EBF4Q9BQW3 602 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 C1orf50Q9BV19 199 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 EBPLQ9BY08 206 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 DPY30Q9C005 99 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 MIEF1Q9NQG6 463 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 GIMAP4Q9NUV9 329 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 ATAD3AQ9NVI7 634 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 EHD3Q9NZN3 535 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 DKK4Q9UBT3 224 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 FARSAQ9Y285 508 aaKnown RBP13.48□□□□□ -0.25
SKA2-205ENST00000580541 ATG4BQ9Y4P1 393 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 MMACHCQ9Y4U1 282 aa13.48□□□□□ -0.25
SKA2-205ENST00000580541 CROCCQ5TZA2 2017 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 AHCTF1Q8WYP5 2266 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 VSTM2BA6NLU5 285 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 E9PBE3 544 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 KLHL41O60662 606 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 CTNSO60931 367 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 HEXBP07686 556 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 G6PDP11413 515 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 SDC1P18827 310 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 SPINK2P20155 84 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 DDCP20711 480 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 STAT5AP42229 794 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 ATP4BP51164 291 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 CLDN8P56748 225 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 MAT1AQ00266 395 aaKnown RBP13.47□□□□□ -0.25
SKA2-205ENST00000580541 NCF4Q15080 339 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 NKG7Q16617 165 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 DPY19L1Q2PZI1 675 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 MINDY4Q4G0A6 757 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 FAM219BQ5XKK7 198 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 OR52E8Q6IFG1 317 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 MRPL14Q6P1L8 145 aaKnown RBP13.47□□□□□ -0.25
SKA2-205ENST00000580541 TIPARPQ7Z3E1 657 aaKnown RBP13.47□□□□□ -0.25
SKA2-205ENST00000580541 PIGWQ7Z7B1 504 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 DTX1Q86Y01 620 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 MIER2Q8N344 545 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 GLB1L3Q8NCI6 653 aaPredicted RBP13.47□□□□□ -0.25
SKA2-205ENST00000580541 ZNF248Q8NDW4 579 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 CDC26Q8NHZ8 85 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.47□□□□□ -0.25
SKA2-205ENST00000580541 METTL21AQ8WXB1 218 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 NKD1Q969G9 470 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 NACC2Q96BF6 587 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 DPH1Q9BZG8 443 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 CCDC86Q9H6F5 360 aaKnown RBP13.47□□□□□ -0.25
SKA2-205ENST00000580541 REEP4Q9H6H4 257 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 PRTFDC1Q9NRG1 225 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 AIG1Q9NVV5 245 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 ARL2BPQ9Y2Y0 163 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 PCDHA9Q9Y5H5 950 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 ZNF780BQ9Y6R6 833 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 SDK2Q58EX2 2172 aa13.47□□□□□ -0.25
SKA2-205ENST00000580541 A0A1W2PR48 441 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 CYR61O00622 381 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 NDUFAB1O14561 156 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 B4GALT2O60909 372 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 SLC22A3O75751 556 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 IL3P08700 152 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 PIK3R1P27986 724 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 PTPN4P29074 926 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 ADSLP30566 484 aaPredicted RBP13.46□□□□□ -0.25
SKA2-205ENST00000580541 DLSTP36957 453 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 FOLR3P41439 243 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 ALDH9A1P49189 494 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 EMP2P54851 167 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 HNRNPH2P55795 449 aaKnown RBP13.46□□□□□ -0.25
SKA2-205ENST00000580541 SRSF11Q05519 484 aaKnown RBP13.46□□□□□ -0.25
SKA2-205ENST00000580541 STX4Q12846 297 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms