RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 OR4L1Q8NH43 312 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 RAB3IL1Q8TBN0 382 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 NTNG2Q96CW9 530 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 ZMYND19Q96E35 227 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 PLPPR2Q96GM1 343 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 TTC1Q99614 292 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 DOHHQ9BU89 302 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 P2RY12Q9H244 342 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 PIGMQ9H3S5 423 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 EML4Q9HC35 981 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 MRFAP1Q9Y605 127 aa12.79□□□□□ -0.36
CSNK1D-213ENST00000580446 A0A0G2JN53 185 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 GRID2IPA4D2P6 1211 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 KIAA0513O60268 411 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 RCBTB2O95199 551 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 POU2F1P14859 743 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 CREB1P16220 341 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 NAGLUP54802 743 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 TBPL1P62380 186 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 SIRPAP78324 504 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 ARHGAP19Q14CB8 494 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 TERF2Q15554 542 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 KLHL38Q2WGJ6 581 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 ZNF791Q3KP31 576 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 CYB5R2Q6BCY4 276 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 YRDCQ86U90 279 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 CAND1Q86VP6 1230 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 SCUBE1Q8IWY4 988 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 FAM47BQ8NA70 645 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 DOK4Q8TEW6 326 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 ABTB1Q969K4 478 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 HS6ST2Q96MM7 605 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 RUNDC3BQ96NL0 473 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 GNRHR2Q96P88 292 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 KLHL4Q9C0H6 718 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 FEZ2Q9UHY8 353 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 VWFP04275 2813 aa12.78□□□□□ -0.36
CSNK1D-213ENST00000580446 HACD1B0YJ81 288 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 H0Y3Z8 333 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 OR1F1O43749 312 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 CTNNA2P26232 953 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 IMPA1P29218 277 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 CDK9P50750 372 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 MTTPP55157 894 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 SLC13A2Q13183 592 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 SF3B4Q15427 424 aaKnown RBP eCLIP12.77□□□□□ -0.372e-10■■■■■ 31.1
CSNK1D-213ENST00000580446 LYPD8Q6UX82 237 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 TMEM64Q6YI46 380 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 WFDC8Q8IUA0 241 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 OR52K1Q8NGK4 314 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 LILRB1Q8NHL6 650 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 UTP15Q8TED0 518 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 PAQR8Q8TEZ7 354 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 ATL1Q8WXF7 558 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 STARD4Q96DR4 205 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 THAP11Q96EK4 314 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 PANX3Q96QZ0 392 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 RHNO1Q9BSD3 238 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 G6PC3Q9BUM1 346 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 SPNS1Q9H2V7 528 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 KLHL31Q9H511 634 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 PRTFDC1Q9NRG1 225 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 QPCTLQ9NXS2 382 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 UVRAGQ9P2Y5 699 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 INTUQ9ULD6 942 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 MAPRE3Q9UPY8 281 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 GTF3C3Q9Y5Q9 886 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 MED12Q93074 2177 aa12.77□□□□□ -0.37
CSNK1D-213ENST00000580446 FREM1Q5H8C1 2179 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 hCG_1818297A0A087WSY0 165 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 C16orf97H3BN30 126 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 METTL18O95568 372 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 TGM6O95932 706 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 C1QAP02745 245 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 CATP04040 527 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 F7P08709 466 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 PSMA3P25788 255 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 FMO4P31512 558 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 MARCKSL1P49006 195 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 ACTG1P63261 375 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 CCZ1BP86790 482 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 CCZ1P86791 482 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 BEX5Q5H9J7 111 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 MBOAT1Q6ZNC8 495 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 PTPMT1Q8WUK0 201 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 ZNF597Q96LX8 424 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 TM9SF2Q99805 663 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 PHACTR1Q9C0D0 580 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 HSD3B7Q9H2F3 369 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 ADAP2Q9NPF8 381 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 FAM114A2Q9NRY5 505 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 CNOT11Q9UKZ1 510 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 CHCHD2Q9Y6H1 151 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 CLCA3PQ9Y6N3 262 aa12.76□□□□□ -0.37
CSNK1D-213ENST00000580446 LRRC14BA6NHZ5 514 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 MSTNO14793 375 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 CLOCKO15516 846 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms