RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 TMEM151AQ8N4L1 468 aa23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 OR52B6Q8NGF0 335 aa23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 HAS2Q92819 552 aa23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 CDK15Q96Q40 435 aa23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 RNF32Q9H0A6 362 aa23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 SEMA4BQ9NPR2 832 aaPredicted RBP23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 PSD3Q9NYI0 1048 aa23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 STMN3Q9NZ72 180 aa23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 ABI3Q9P2A4 366 aa23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 DCDC2Q9UHG0 476 aa23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 CNTRLQ7Z7A1 2325 aa23.27■■□□□ 1.32
CDC42EP4-205ENST00000580315 SAGE2PA6NJ88 616 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 CYR61O00622 381 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 OTCP00480 354 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 TTC19Q6DKK2 380 aaPredicted RBP23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 MILR1Q7Z6M3 343 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 TDRPQ86YL5 185 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 RNF175Q8N4F7 328 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 SLC5A8Q8N695 610 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 GRHL3Q8TE85 626 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 MZB1Q8WU39 189 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 NSUN5Q96P11 429 aaKnown RBP23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 C1QTNF3Q9BXJ4 246 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 ZBTB26Q9HCK0 441 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 PLA2G3Q9NZ20 509 aa23.26■■□□□ 1.31
CDC42EP4-205ENST00000580315 FOXE1O00358 373 aaPredicted RBP23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 LRRTM2O43300 516 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 KRT15P19012 456 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 SLCO1A2P46721 670 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 HERVK_113P63132 956 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 TRAF3Q13114 568 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 CUL3Q13618 768 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 TERF2Q15554 542 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 H3F3CQ6NXT2 135 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 AMER2Q8N7J2 671 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 WDR20Q8TBZ3 569 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 ZNF483Q8TF39 744 aaPredicted RBP23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 CSF3RQ99062 836 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 MAPKAP1Q9BPZ7 522 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 ERVK-6Q9BXR3 956 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.25■■□□□ 1.312e-6■□□□□ 11.3
CDC42EP4-205ENST00000580315 KCMF1Q9P0J7 381 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 OSGIN2Q9Y236 505 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 CSMD1Q96PZ7 3565 aa23.25■■□□□ 1.31
CDC42EP4-205ENST00000580315 DIDO1Q9BTC0 2240 aaKnown RBP23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 TRAV17A0A0B4J275 112 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 SMIM23A6NLE4 172 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 A8MUA0 341 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 CTNSO60931 367 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 WDPCPO95876 746 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 ATP5F1P24539 256 aaPredicted RBP23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 TNFSF10P50591 281 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 HNRNPFP52597 415 aaKnown RBP23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 VSNL1P62760 191 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 IFT88Q13099 833 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 RASA2Q15283 850 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 MEP1AQ16819 746 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 GGTA1PQ4G0N0 100 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 ACER2Q5QJU3 275 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 FRG2Q64ET8 278 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 SLC22A9Q8IVM8 553 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 SLC34A3Q8N130 599 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 TMEM52Q8NDY8 209 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 CATSPER1Q8NEC5 780 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 C7orf57Q8NEG2 295 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 OR1N1Q8NGS0 311 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 SUN3Q8TAQ9 357 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 FAR1Q8WVX9 515 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 FRG2BQ96QU4 278 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 SERPINI1Q99574 410 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 PNO1Q9NRX1 252 aaKnown RBP23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 MS4A12Q9NXJ0 267 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 FBXW2Q9UKT8 454 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 PPT2Q9UMR5 302 aa23.24■■□□□ 1.31
CDC42EP4-205ENST00000580315 DOCK10Q96BY6 2186 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 ESPNB1AK53 854 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 PLPP1O14494 284 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 CDH16O75309 829 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 GLRA3O75311 464 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 CPN2P22792 545 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 HSD17B3P37058 310 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 NEK2P51955 445 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 STX4Q12846 297 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 SLAMF1Q13291 335 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 CLNKQ7Z7G1 428 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 ZCCHC7Q8N3Z6 543 aaKnown RBP23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 OR4F6Q8NGB9 312 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 ELP5Q8TE02 316 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 MTFMTQ96DP5 389 aaKnown RBP23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 SORBS1Q9BX66 1292 aaKnown RBP23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 ELOVL6Q9H5J4 265 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 PHF11Q9UIL8 331 aa23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 TEP1Q99973 2627 aaKnown RBP23.23■■□□□ 1.31
CDC42EP4-205ENST00000580315 A0A1W2PPM1 405 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 OR5H15A6NDH6 313 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 DLX3O60479 287 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 MYO1DO94832 1006 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 SUPT7LO94864 414 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 EDN3P14138 238 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 CCT5P48643 541 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms