RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 SLC14A2Q15849 920 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 DPYSL2Q16555 572 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 FBXO48Q5FWF7 155 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 OGFOD2Q6N063 350 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 TRAPPC6BQ86SZ2 158 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 MRPL52Q86TS9 123 aaKnown RBP4.95□□□□□ -1.62
NF1-219ENST00000579081 RCBTB1Q8NDN9 531 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 OR5B17Q8NGF7 314 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 CMTM3Q96MX0 182 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 GPRC5BQ9NZH0 403 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 SLC17A7Q9P2U7 560 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 REV1Q9UBZ9 1251 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 IL20RAQ9UHF4 553 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 CICQ96RK0 1608 aaPredicted RBP4.95□□□□□ -1.62
NF1-219ENST00000579081 BLOC1S5-TXNDC5H3BN57 136 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 IMPA2O14732 288 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 SYN3O14994 580 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 DIRAS3O95661 229 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 H2BFMP0C1H6 154 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 GKN3PP0CG01 181 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 PBX3P40426 434 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 SMSP52788 366 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 RUNX2Q13950 521 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 TAF1AQ15573 450 aaPredicted RBP4.95□□□□□ -1.62
NF1-219ENST00000579081 RAB30Q15771 203 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 TPRG1LQ5T0D9 272 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 ARHGAP11AQ6P4F7 1023 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 HAGHLQ6PII5 290 aaPredicted RBP4.95□□□□□ -1.62
NF1-219ENST00000579081 UQCC3Q6UW78 93 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 DCDC5Q6ZRR9 648 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 BPIFB1Q8TDL5 484 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 ZNF431Q8TF32 576 aaPredicted RBP4.95□□□□□ -1.62
NF1-219ENST00000579081 S100A16Q96FQ6 103 aaKnown RBP4.95□□□□□ -1.62
NF1-219ENST00000579081 HMCESQ96FZ2 354 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 SLC25A44Q96H78 314 aaPredicted RBP4.95□□□□□ -1.62
NF1-219ENST00000579081 ELF4Q99607 663 aaPredicted RBP4.95□□□□□ -1.62
NF1-219ENST00000579081 RAD9AQ99638 391 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 DUSP9Q99956 384 aaKnown RBP4.95□□□□□ -1.62
NF1-219ENST00000579081 TIGARQ9NQ88 270 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 ZNF701Q9NV72 531 aaPredicted RBP4.95□□□□□ -1.62
NF1-219ENST00000579081 RNF215Q9Y6U7 377 aa4.95□□□□□ -1.62
NF1-219ENST00000579081 COL1A2P08123 1366 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 MYO5BQ9ULV0 1848 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 K7EPI3 171 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 NDUFS4O43181 175 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 RNF13O43567 381 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 MFSD11O43934 449 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 NOBOXO60393 691 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 CREBL2O60519 120 aaPredicted RBP4.94□□□□□ -1.62
NF1-219ENST00000579081 CYP11A1P05108 521 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 GJB1P08034 283 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 GGT2P36268 569 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 ACTBP60709 375 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 ACTG1P63261 375 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 PMS2P3Q13401 168 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 NTRK3Q16288 839 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 NTRK2Q16620 822 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 PXDC1Q5TGL8 231 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 WDR88Q6ZMY6 472 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 RASGEF1CQ8N431 466 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 SLC37A3Q8NCC5 494 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 ELP5Q8TE02 316 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 BCL7CQ8WUZ0 217 aaPredicted RBP4.94□□□□□ -1.62
NF1-219ENST00000579081 RPL10LQ96L21 214 aaKnown RBP4.94□□□□□ -1.62
NF1-219ENST00000579081 MAPKAP1Q9BPZ7 522 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 SLCO5A1Q9H2Y9 848 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 ACTL8Q9H568 366 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 CXorf21Q9HAI6 301 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 CPNE7Q9UBL6 633 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 LAMP5Q9UJQ1 280 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 PCDHB14Q9Y5E9 798 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 UBIAD1Q9Y5Z9 338 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 SCN11AQ9UI33 1791 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 SPATA31A5Q5VU36 1347 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 SPATA31A7Q8IWB4 1347 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 TMEM88BA6NKF7 163 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 FSCN2O14926 492 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 VILLO15195 856 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 MATN3O15232 486 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 MT-CO2P00403 227 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 H1F0P07305 194 aaKnown RBP4.94□□□□□ -1.62
NF1-219ENST00000579081 RAP2AP10114 183 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 HOXD8P13378 290 aaPredicted RBP4.94□□□□□ -1.62
NF1-219ENST00000579081 THBS2P35442 1172 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 TAS2R40P59535 323 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 IL10RBQ08334 325 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 ST3GAL3Q11203 375 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 TMCO2Q7Z6W1 182 aaPredicted RBP4.94□□□□□ -1.62
NF1-219ENST00000579081 LGI4Q8N135 537 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 STT3BQ8TCJ2 826 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 FRS2Q8WU20 508 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 DNTTIP1Q9H147 329 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 MAGIXQ9H6Y5 334 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 ABCB8Q9NUT2 735 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 ICKQ9UPZ9 632 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 POMT1Q9Y6A1 747 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 C9JVG2 144 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 FTCDNL1E5RQL4 147 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 H7C1Q1 480 aa4.94□□□□□ -1.62
NF1-219ENST00000579081 CLN5O75503 358 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms