RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 TGFB1P01137 390 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 CELA3AP09093 270 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 MSH2P43246 934 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 DNASE1L1P49184 302 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 HK2P52789 917 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 MTTPP55157 894 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 HSD17B7P56937 341 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 NUP107P57740 925 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 PMPCAQ10713 525 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 STX4Q12846 297 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 DLG1Q12959 904 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 CHIT1Q13231 466 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 ADPRMQ3LIE5 342 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 TRIM40Q6P9F5 258 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 HSDL2Q6YN16 418 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 DGAT2L6Q6ZPD8 337 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 CMC1Q7Z7K0 106 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 ZNF595Q8IYB9 648 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 POGLUT1Q8NBL1 392 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 PSD4Q8NDX1 1056 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 TTLQ8NG68 377 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 OR2L5Q8NG80 312 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 OR2M7Q8NG81 312 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 PYROXD1Q8WU10 500 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 PHF10Q8WUB8 498 aaKnown RBP8.29□□□□□ -1.08
GGA3-207ENST00000578896 CHTF18Q8WVB6 975 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 ASB15Q8WXK1 588 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 ANKRD7Q92527 254 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 PPWD1Q96BP3 646 aaKnown RBP8.29□□□□□ -1.08
GGA3-207ENST00000578896 SCYL1Q96KG9 808 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 RASL10BQ96S79 203 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 SERINC2Q96SA4 455 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 DERL2Q9GZP9 239 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 NT5DC2Q9H857 520 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 COPS7BQ9H9Q2 264 aaPredicted RBP8.29□□□□□ -1.08
GGA3-207ENST00000578896 ADAP2Q9NPF8 381 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 TIMMDC1Q9NPL8 285 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 SEMA4BQ9NPR2 832 aaPredicted RBP8.29□□□□□ -1.08
GGA3-207ENST00000578896 NPDC1Q9NQX5 325 aaPredicted RBP8.29□□□□□ -1.08
GGA3-207ENST00000578896 PNPLA3Q9NST1 481 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 COQ3Q9NZJ6 369 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 MYOTQ9UBF9 498 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 PPIEQ9UNP9 301 aaKnown RBP8.29□□□□□ -1.08
GGA3-207ENST00000578896 SAR1BQ9Y6B6 198 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 CLCA3PQ9Y6N3 262 aa8.29□□□□□ -1.08
GGA3-207ENST00000578896 ANKHD1Q8IWZ3 2542 aaKnown RBP8.29□□□□□ -1.08
GGA3-207ENST00000578896 ZNF469Q96JG9 3925 aaPredicted RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 C17orf105B2RV13 164 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 HRKO00198 91 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 PRKRAO75569 313 aaKnown RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 ETHE1O95571 254 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 TUBB4AP04350 444 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 PCNAP12004 261 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 ATP5A1P25705 553 aaKnown RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 SSTR2P30874 369 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 GPX6P59796 221 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 POU4F1Q01851 419 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 IRF8Q02556 426 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 DDX39BQ13838 428 aaKnown RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 SNTB1Q13884 538 aaKnown RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 EFTUD2Q15029 972 aaKnown RBP eCLIP8.28□□□□□ -1.08
GGA3-207ENST00000578896 TRADDQ15628 312 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 ELAVL1Q15717 326 aaKnown RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 PDK4Q16654 411 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 GXYLT1Q4G148 440 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 SULT1C3Q6IMI6 304 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 ZNF585AQ6P3V2 769 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 CTAGE3PQ8IX95 158 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 TMEM132CQ8N3T6 1108 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 TMEM251Q8N6I4 163 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 ACOT4Q8N9L9 421 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 SLC2A12Q8TD20 617 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 ZNF473Q8WTR7 871 aaKnown RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 NRGNQ92686 78 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 UCN3Q969E3 161 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 ANKRD9Q96BM1 317 aaPredicted RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 PTCD3Q96EY7 689 aaKnown RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 RUNDC3BQ96NL0 473 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 NAPGQ99747 312 aaPredicted RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 SPOCK3Q9BQ16 436 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 TTTY12Q9BZ98 90 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 ENKD1Q9H0I2 346 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 OR51B5Q9H339 312 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 ALG9Q9H6U8 611 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 GRPEL1Q9HAV7 217 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 POPDC3Q9HBV1 291 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 GPRC5BQ9NZH0 403 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 VTI1BQ9UEU0 232 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 PTBP2Q9UKA9 531 aaKnown RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 RNF112Q9ULX5 631 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 PYCARDQ9ULZ3 195 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 MRPS33Q9Y291 106 aaKnown RBP8.28□□□□□ -1.08
GGA3-207ENST00000578896 ARHGAP21Q5T5U3 1957 aa8.28□□□□□ -1.08
GGA3-207ENST00000578896 A0A088AWK7 358 aa8.27□□□□□ -1.09
GGA3-207ENST00000578896 ATP6AP2A0A1C7CYW4 349 aa8.27□□□□□ -1.09
GGA3-207ENST00000578896 TCRBV9S1A1TA0A576 114 aa8.27□□□□□ -1.09
GGA3-207ENST00000578896 LRRC14BA6NHZ5 514 aa8.27□□□□□ -1.09
GGA3-207ENST00000578896 CCDC188H7C350 402 aa8.27□□□□□ -1.09
GGA3-207ENST00000578896 UBXN8O00124 270 aa8.27□□□□□ -1.09
GGA3-207ENST00000578896 RAD51CO43502 376 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms