RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	ARHGAP21	Q5T5U3	1957 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329		A0A0G2JNJ9	132 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329		A0A1W2PR48	441 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ENO4	A6NNW6	628 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C17orf51	A8MQB3	221 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM166B	A8MTA8	275 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	UBXN8	O00124	270 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	WWP2	O00308	870 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SAP18	O00422	153 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PPP6C	O00743	305 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PLPP1	O14494	284 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KLK8	O60259	260 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CTNS	O60931	367 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	WDR47	O94967	919 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LRAT	O95237	230 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SERPIND1	P05546	499 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CT62	P0C5K7	136 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CCDC166	P0CW27	439 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GLI4	P10075	376 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CD46	P15529	392 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF24	P17028	368 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HOXB4	P17483	251 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SAT1	P21673	171 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MSX1	P28360	303 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ECHS1	P30084	290 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	BSG	P35613	385 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PIGA	P37287	484 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PTGDS	P41222	190 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MAGEA5	P43359	124 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DNASE1L1	P49184	302 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CYB561	P49447	251 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RGS4	P49798	205 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HSD17B7	P56937	341 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RNF4	P78317	190 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DR1	Q01658	176 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OC90	Q02509	493 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ACTN3	Q08043	901 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MGAT2	Q10469	447 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PDAP1	Q13442	181 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RBBP5	Q15291	538 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PPP1R7	Q15435	360 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TBCC	Q15814	346 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KBTBD12	Q3ZCT8	623 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GXYLT1	Q4G148	440 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DCST1	Q5T197	706 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	BICRAL	Q6AI39	1079 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LRRC8E	Q6NSJ5	796 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TMIGD1	Q6UXZ0	262 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TMEM64	Q6YI46	380 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SPNS3	Q6ZMD2	512 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CAPN12	Q6ZSI9	719 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CYS1	Q717R9	158 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RPS27L	Q71UM5	84 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PLD6	Q8N2A8	252 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GHDC	Q8N2G8	530 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC5A8	Q8N695	610 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ACOT4	Q8N9L9	421 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RELL2	Q8NC24	303 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PSD4	Q8NDX1	1056 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TRPV3	Q8NET8	790 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR7G3	Q8NG95	312 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LILRB4	Q8NHJ6	448 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	UBTD2	Q8WUN7	234 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KIAA1191	Q96A73	305 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PPWD1	Q96BP3	646 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SDCCAG3	Q96C92	435 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LRRC39	Q96DD0	335 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KRT12	Q99456	494 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RBBP8	Q99708	897 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	AIF1L	Q9BQI0	150 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NAT9	Q9BTE0	207 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	G6PC3	Q9BUM1	346 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NPL	Q9BXD5	320 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ALOXE3	Q9BYJ1	711 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TTTY12	Q9BZ98	90 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM129A	Q9BZQ8	928 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CCDC68	Q9H2F9	335 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR51B5	Q9H339	312 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	EHD1	Q9H4M9	534 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CLK4	Q9HAZ1	481 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	POPDC3	Q9HBV1	291 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MCCC2	Q9HCC0	563 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZBTB26	Q9HCK0	441 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DLL4	Q9NR61	685 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PRTFDC1	Q9NRG1	225 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PNO1	Q9NRX1	252 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZDHHC18	Q9NUE0	388 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF358	Q9NW07	568 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329		Q9UFV3	132 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TRPS1	Q9UHF7	1281 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF225	Q9UK10	706 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CNOT11	Q9UKZ1	510 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DTX4	Q9Y2E6	619 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ATG4B	Q9Y4P1	393 aa		4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KCNE2	Q9Y6J6	123 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms