RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 PTCD3Q96EY7 689 aaKnown RBP13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 OSBPL9Q96SU4 736 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 TTYH2Q9BSA4 534 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 ALOXE3Q9BYJ1 711 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 OR8D2Q9GZM6 311 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 LYRM4Q9HD34 91 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 PNPLA3Q9NST1 481 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 DNAJC11Q9NVH1 559 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 DNAJB12Q9NXW2 375 aaKnown RBP13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 TXNDC16Q9P2K2 825 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 VTI1BQ9UEU0 232 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 ZNF223Q9UK11 482 aaPredicted RBP13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 BOKQ9UMX3 212 aaPredicted RBP13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 DAPP1Q9UN19 280 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 PCNX1Q96RV3 2341 aa13.18□□□□□ -0.3
SMARCD2-205ENST00000577686 A0A1B0GVC2 190 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 C17orf105B2RV13 164 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 GLSO94925 669 aaPredicted RBP13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 PPP2R1BP30154 601 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 DNAJA1P31689 397 aaKnown RBP13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 HNRNPH1P31943 449 aaKnown RBP13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 SLC6A12P48065 614 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 HK2P52789 917 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 LIM2P55344 173 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 ADPRMQ3LIE5 342 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 EMC4Q5J8M3 183 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 STEAP4Q687X5 459 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 ABHD17CQ6PCB6 329 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 LIX1Q8N485 282 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 SNX31Q8N9S9 440 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 RHBDF1Q96CC6 855 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 QRFPRQ96P65 431 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 FOXC2Q99958 501 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 CENPKQ9BS16 269 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 TBCDQ9BTW9 1192 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 DEPPQ9NTK1 212 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 SLC17A6Q9P2U8 582 aa13.17□□□□□ -0.3
SMARCD2-205ENST00000577686 ADGRG4Q8IZF6 3080 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 TRGV5A0A0B4J1U4 118 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 C4orf51C9J302 202 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 BANF1O75531 89 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 GLI4P10075 376 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 CERS1P27544 350 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 SERPINB1P30740 379 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 MAGEA5P43359 124 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 RNF4P78317 190 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 SF3B4Q15427 424 aaKnown RBP eCLIP13.16□□□□□ -0.37e-9■■■■□ 25.7
SMARCD2-205ENST00000577686 TGFBIQ15582 683 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 TSNQ15631 228 aaKnown RBP13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 PDK4Q16654 411 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 MPEG1Q2M385 716 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 HYAL4Q2M3T9 481 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 MSS51Q4VC12 460 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 TMEM35AQ53FP2 167 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 XKR6Q5GH73 641 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 RIPPLY2Q5TAB7 128 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 SULT1C3Q6IMI6 304 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 ZC3HC1Q86WB0 502 aaKnown RBP13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 FBXW8Q8N3Y1 598 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 TMEM251Q8N6I4 163 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 SLC2A12Q8TD20 617 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 CDKL2Q92772 493 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 RMND5BQ96G75 393 aaPredicted RBP13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 DGAT2Q96PD7 388 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 PELOQ9BRX2 385 aaKnown RBP13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 POLDIP3Q9BY77 421 aaKnown RBP13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 DERL2Q9GZP9 239 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 MS4A12Q9NXJ0 267 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 PCDHGB3Q9Y5G1 929 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 HRH3Q9Y5N1 445 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 HIVEP1P15822 2718 aa13.16□□□□□ -0.3
SMARCD2-205ENST00000577686 ATP6AP2A0A1C7CYW4 349 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 NCF1BA6NI72 391 aaPredicted RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 HSPB2A8KAH6 182 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 NCF1CA8MVU1 366 aaPredicted RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 G3V3Y1 287 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 CYR61O00622 381 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 PRKNO60260 465 aaPredicted RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 STK16O75716 305 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 ATP6AP2O75787 350 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 NCF1P14598 390 aaPredicted RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 DNASE1P24855 282 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 KIR2DL3P43628 341 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 HNRNPFP52597 415 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 ATP6V0D1P61421 351 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 KCNJ2P63252 427 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 PLIN5Q00G26 463 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 POU4F1Q01851 419 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 HSPB2Q16082 182 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 AP5B1Q2VPB7 878 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 ZNF750Q32MQ0 723 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 SLC22A10Q63ZE4 541 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 TRMT10BQ6PF06 316 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 ARSKQ6UWY0 536 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 CHSY3Q70JA7 882 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 WDR53Q7Z5U6 358 aaPredicted RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 GPSM1Q86YR5 675 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 RPRMLQ8N4K4 120 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms