RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PRAMEF14Q5SWL7 426 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 PRAMEF13Q5VWM6 474 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 LCTLQ6UWM7 567 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 LAS2Q8IYD9 372 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 TBC1D21Q8IYX1 336 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 FAM109AQ8N4B1 249 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 C2orf73Q8N5S3 287 aaPredicted RBP13.18□□□□□ -0.3
RNF43-202ENST00000577625 IL17RDQ8NFM7 739 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 DNAJB8Q8NHS0 232 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 C12orf66Q96MD2 445 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 OR52E6Q96RD3 313 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 INSM2Q96T92 566 aaPredicted RBP13.18□□□□□ -0.3
RNF43-202ENST00000577625 BTBD2Q9BX70 525 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 SPNS1Q9H2V7 528 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 ATP13A2Q9NQ11 1180 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 VAPAQ9P0L0 249 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 USP36Q9P275 1121 aaKnown RBP13.18□□□□□ -0.3
RNF43-202ENST00000577625 EGFL7Q9UHF1 273 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 KNL1Q8NG31 2342 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 GON4LQ3T8J9 2241 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 PIPSLA2A3N6 862 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 LRRC72A6NJI9 287 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 PDZK1P1A8MUH7 402 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 ZNF99A8MXY4 864 aaPredicted RBP13.18□□□□□ -0.3
RNF43-202ENST00000577625 C10orf142B7Z368 130 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 ARPC2O15144 300 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 PRMT3O60678 531 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 KCNJ13O60928 360 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 ETHE1O95571 254 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 HTR1AP08908 422 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 PCNAP12004 261 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 PRPS1L1P21108 318 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 HSD17B2P37059 387 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 ACSM2AQ08AH3 577 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 TOP3AQ13472 1001 aaPredicted RBP13.18□□□□□ -0.3
RNF43-202ENST00000577625 DPY19L1Q2PZI1 675 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 TPRG1LQ5T0D9 272 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 TMEM236Q5W0B7 351 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 ACSM2BQ68CK6 577 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 NXPE4Q6UWF7 544 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 GLRX5Q86SX6 157 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 IFNEQ86WN2 208 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 PROX1Q92786 737 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 MAP6Q96JE9 813 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 AASDHPPTQ9NRN7 309 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 PPT2Q9UMR5 302 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 MAN2B2Q9Y2E5 1009 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 FOXE1O00358 373 aaPredicted RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 SCAMP1O15126 338 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 SHOXO15266 292 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 HNRNPA2B1P22626 353 aaKnown RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 OXTRP30559 389 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 S100A3P33764 101 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 TAGLNQ01995 201 aaKnown RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 LAPTM5Q13571 262 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 NFATC4Q14934 902 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 CCBE1Q6UXH8 406 aaPredicted RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 MSANTD1Q6ZTZ1 278 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 PAGE2Q7Z2X7 111 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 C8orf59Q8N0T1 100 aaPredicted RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 ZNF687Q8N1G0 1237 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 OR1E3Q8WZA6 343 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 HLA-CQ95604 372 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 PDXPQ96GD0 296 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 BMFQ96LC9 184 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 EBPLQ9BY08 206 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 PAK1IP1Q9NWT1 392 aaPredicted RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 NAALAD2Q9Y3Q0 740 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 MAN2B1O00754 1011 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 FPGTO14772 594 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 TBX1O43435 398 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 DFNA5O60443 496 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 INMTO95050 263 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 LDLRP01130 860 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 PCMT1P22061 227 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 DDOSTP39656 456 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 OR3A3P47888 321 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 SEPHS1P49903 392 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 AP2S1P53680 142 aaPredicted RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 C21orf58P58505 322 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 MTPNP58546 118 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 RPS13P62277 151 aaKnown RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 PLIN5Q00G26 463 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 MEF2AQ02078 507 aaPredicted RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 MTAPQ13126 283 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 CLCA4Q14CN2 919 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 SPIN4Q56A73 249 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 LRIF1Q5T3J3 769 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 CCNJQ5T5M9 372 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 HIST2H2AA3Q6FI13 130 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 GCNT7Q6ZNI0 430 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 SYT12Q8IV01 421 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 PAPD5Q8NDF8 572 aaKnown RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 CHTF18Q8WVB6 975 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 SGCDQ92629 289 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 OR2M4Q96R27 311 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 ASPSCR1Q9BZE9 553 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 SLIRPQ9GZT3 109 aaKnown RBP13.17□□□□□ -0.3
RNF43-202ENST00000577625 KCNH6Q9H252 994 aa13.17□□□□□ -0.3
RNF43-202ENST00000577625 CARS2Q9HA77 564 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms