RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 LIPJQ5W064 366 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 C16orf47Q6ZP98 133 aaPredicted RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 FJX1Q86VR8 437 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 PTGR2Q8N8N7 351 aaPredicted RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 SRFBP1Q8NEF9 429 aaKnown RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 OR52B6Q8NGF0 335 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 CMTM7Q96FZ5 175 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 VMP1Q96GC9 406 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 CDK15Q96Q40 435 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 TSPAN10Q9H1Z9 355 aaPredicted RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 TRIM45Q9H8W5 580 aaPredicted RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 IPPKQ9H8X2 491 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 ACTR8Q9H981 624 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 NFU1Q9UMS0 254 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 TSC22D4Q9Y3Q8 395 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 ANGPTL3Q9Y5C1 460 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 CELSR2Q9HCU4 2923 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 CACNA1DQ01668 2161 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 TMEM200CA6NKL6 621 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 TRIM49D1C9J1S8 452 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 KIF2AO00139 706 aaPredicted RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 OR7A17O14581 309 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 NME2P1O60361 137 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 CTNSO60931 367 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 PRKRAO75569 313 aaKnown RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 SLC25A12O75746 678 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 ETHE1O95571 254 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 MYBL2P10244 700 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 NME2P22392 152 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 TRHRP34981 398 aaPredicted RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 PIK3CBP42338 1070 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 PIK3CGP48736 1102 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 CYB561P49447 251 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 SERPINB9P50453 376 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 HNRNPH2P55795 449 aaKnown RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 RPS13P62277 151 aaKnown RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 ID2Q02363 134 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 ELAVL1Q15717 326 aaKnown RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 CPSF6Q16630 551 aaKnown RBP eCLIP11.81□□□□□ -0.52
SSH2-205ENST00000577483 DEPDC1Q5TB30 811 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 FAM219BQ5XKK7 198 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 MAMDC2Q7Z304 686 aaPredicted RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 ZNF321PQ8N8H1 164 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 TMEM178AQ8NBL3 297 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 KIF18AQ8NI77 898 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 WDR20Q8TBZ3 569 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 PTPMT1Q8WUK0 201 aaPredicted RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 ANKRD9Q96BM1 317 aaPredicted RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 PHF21BQ96EK2 531 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 NSUN5Q96P11 429 aaKnown RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 ALOXE3Q9BYJ1 711 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 ROGDIQ9GZN7 287 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 LIN28AQ9H9Z2 209 aaKnown RBP11.81□□□□□ -0.52
SSH2-205ENST00000577483 SEC14L3Q9UDX4 400 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 VTI1BQ9UEU0 232 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 ZNF180Q9UJW8 692 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 FBXW2Q9UKT8 454 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 RNF11Q9Y3C5 154 aa11.81□□□□□ -0.52
SSH2-205ENST00000577483 A0A087WUV0 522 aaPredicted RBP11.8□□□□□ -0.52
SSH2-205ENST00000577483 A0A1B0GTL3 188 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 H0YIV9 168 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 FCHO1O14526 889 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 FGF17O60258 216 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 UGDHO60701 494 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 ZG16O60844 167 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 ITGA10O75578 1167 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 TUBB4AP04350 444 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 SBK3P0C264 359 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 HLCSP50747 726 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 SLAMF1Q13291 335 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 MAPKAPK3Q16644 382 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 AP5B1Q2VPB7 878 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 OR4C11Q6IEV9 310 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 SLC25A25Q6KCM7 469 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 CHSY3Q70JA7 882 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 RPS27LQ71UM5 84 aaKnown RBP11.8□□□□□ -0.52
SSH2-205ENST00000577483 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.8□□□□□ -0.52
SSH2-205ENST00000577483 CPSF7Q8N684 471 aaKnown RBP11.8□□□□□ -0.52
SSH2-205ENST00000577483 L3MBTL4Q8NA19 623 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 SREK1Q8WXA9 508 aaKnown RBP11.8□□□□□ -0.52
SSH2-205ENST00000577483 NOL11Q9H8H0 719 aaKnown RBP11.8□□□□□ -0.52
SSH2-205ENST00000577483 ZBTB26Q9HCK0 441 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 PRM3Q9NNZ6 103 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 ADGRE2Q9UHX3 823 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 PCTPQ9UKL6 214 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 PCDHGA11Q9Y5H2 935 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 IKBKGQ9Y6K9 419 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 UNC79Q9P2D8 2635 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 PCNX1Q96RV3 2341 aa11.8□□□□□ -0.52
SSH2-205ENST00000577483 CACNA1CQ13936 2221 aa11.79□□□□□ -0.52
SSH2-205ENST00000577483 ZNF407Q9C0G0 2248 aa11.79□□□□□ -0.52
SSH2-205ENST00000577483 EXOC1LA0A1B0GW35 172 aa11.79□□□□□ -0.52
SSH2-205ENST00000577483 KRT38O76015 456 aa11.79□□□□□ -0.52
SSH2-205ENST00000577483 IFNA16P05015 189 aa11.79□□□□□ -0.52
SSH2-205ENST00000577483 RBP1P09455 135 aa11.79□□□□□ -0.52
SSH2-205ENST00000577483 FREM3P0C091 2139 aa11.79□□□□□ -0.52
SSH2-205ENST00000577483 CPN2P22792 545 aa11.79□□□□□ -0.52
SSH2-205ENST00000577483 CNTFP26441 200 aa11.79□□□□□ -0.52
SSH2-205ENST00000577483 NEK2P51955 445 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms