RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 ZNF670Q9BS34 389 aa13.09□□□□□ -0.31
SLC12A4-216ENST00000576377 CACNG6Q9BXT2 260 aa13.09□□□□□ -0.31
SLC12A4-216ENST00000576377 PACSIN1Q9BY11 444 aa13.09□□□□□ -0.31
SLC12A4-216ENST00000576377 UNKLQ9H9P5 680 aaKnown RBP13.09□□□□□ -0.31
SLC12A4-216ENST00000576377 PCDHB10Q9UN67 800 aa13.09□□□□□ -0.31
SLC12A4-216ENST00000576377 TENM2Q9NT68 2774 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 VWC2LB2RUY7 222 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 GFYI3L273 518 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 CHST10O43529 356 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 TGM6O95932 706 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 LIMS1P48059 325 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 CDK9P50750 372 aaKnown RBP13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 PCDH1Q08174 1060 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 FOXL1Q12952 345 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 PDK2Q15119 407 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 HECTD2Q5U5R9 776 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 SLC22A10Q63ZE4 541 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 DEF8Q6ZN54 512 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 RAD51AP1Q96B01 352 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 PDLIM2Q96JY6 352 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 ADAD1Q96M93 576 aaKnown RBP13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 BPIFA3Q9BQP9 254 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 EIF2B3Q9NR50 452 aaKnown RBP13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 PNO1Q9NRX1 252 aaKnown RBP13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 TAC3Q9UHF0 121 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 HEY1Q9Y5J3 304 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 NOTCH3Q9UM47 2321 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 HERC2O95714 4834 aa13.08□□□□□ -0.32
SLC12A4-216ENST00000576377 PABPN1LA6NDY0 278 aaKnown RBP13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 C3orf70A6NLC5 250 aaPredicted RBP13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 SMTNL1A8MU46 457 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 H0Y3Z8 333 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 SMAD9O15198 467 aaKnown RBP13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 LY6HO94772 140 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 C1orf105O95561 183 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 C1QAP02745 245 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 SERPING1P05155 500 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 HPNP05981 417 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 ARHGAP25P42331 645 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 TNNT3P45378 269 aaPredicted RBP13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 NAGLUP54802 743 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 EEF1A1P68104 462 aaKnown RBP13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 SIRPAP78324 504 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 SRYQ05066 204 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 TSTA3Q13630 321 aaPredicted RBP13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 TERF2Q15554 542 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 TEX44Q53QW1 395 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 EEF1A1P5Q5VTE0 462 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 ICE2Q659A1 982 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 ALKBH2Q6NS38 261 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 OPN5Q6U736 354 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 ATG4DQ86TL0 474 aaPredicted RBP13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 ZNF610Q8N9Z0 462 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 MAGEC3Q8TD91 643 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 PAQR8Q8TEZ7 354 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 ZNF830Q96NB3 372 aaPredicted RBP13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 UCN2Q96RP3 112 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 UBQLN3Q9H347 655 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 PRDM9Q9NQV7 894 aa13.07□□□□□ -0.32
SLC12A4-216ENST00000576377 GPC4O75487 556 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 AGTP01019 485 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 CGAP01215 116 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 RPA3P35244 121 aaPredicted RBP13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 EIF3BP55884 814 aaKnown RBP13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 RELAQ04206 551 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 ZNF791Q3KP31 576 aaPredicted RBP13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 LDB1Q86U70 411 aaPredicted RBP13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 RAB42Q8N4Z0 105 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 ZNF321PQ8N8H1 164 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 FBF1Q8TES7 1133 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 DNAJC1Q96KC8 554 aaKnown RBP13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 GRIP2Q9C0E4 1043 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 ESM1Q9NQ30 184 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 CTTNBP2NLQ9P2B4 639 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 HEY2Q9UBP5 337 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 BZW2Q9Y6E2 419 aaKnown RBP13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 DNAH1Q9P2D7 4330 aa13.06□□□□□ -0.32
SLC12A4-216ENST00000576377 KIF5CO60282 957 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 PRB2P02812 416 aaPredicted RBP13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 HKR1P10072 659 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 RBP3P10745 1247 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 KIR2DL2P43627 348 aaPredicted RBP13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 PRDX1Q06830 199 aaKnown RBP13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 KIF5AQ12840 1032 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 EXOC3L2Q2M3D2 409 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 SLC9A4Q6AI14 798 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 TTC23LQ6PF05 361 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 HSDL2Q6YN16 418 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 GRAMD2AQ8IUY3 354 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 MAP7D3Q8IWC1 876 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 TP53INP1Q96A56 240 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 ZNF597Q96LX8 424 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 SAE1Q9UBE0 346 aaPredicted RBP13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 TTC7AQ9ULT0 858 aaPredicted RBP13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 CAPN11Q9UMQ6 739 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 PLCE1Q9P212 2302 aa13.05□□□□□ -0.32
SLC12A4-216ENST00000576377 C5orf60A6NFR6 353 aa13.04□□□□□ -0.32
SLC12A4-216ENST00000576377 OR1I1O60431 355 aa13.04□□□□□ -0.32
SLC12A4-216ENST00000576377 TRIM3O75382 744 aaPredicted RBP13.04□□□□□ -0.32
SLC12A4-216ENST00000576377 PPP3CBP16298 524 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms