RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 PHLPP2Q6ZVD8 1323 aa5.39□□□□□ -1.55
VPS53-219ENST00000576019 F5P12259 2224 aa5.39□□□□□ -1.55
VPS53-219ENST00000576019 GOLGA4Q13439 2230 aaKnown RBP5.39□□□□□ -1.55
VPS53-219ENST00000576019 NBEAL2Q6ZNJ1 2754 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 EML5Q05BV3 1969 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 A0A0U1RQJ8 604 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 TMEM129A0AVI4 362 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 HYKKA2RU49 373 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 OR2M5A3KFT3 312 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 ASB14A6NK59 587 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 FAM25EA8MYX2 175 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 XPO1O14980 1071 aaKnown RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 ADAM12O43184 909 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 ZIC3O60481 467 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 ERLIN1O75477 346 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 TOM1L1O75674 476 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 OR6A2O95222 327 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 GAS8O95995 478 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 MOCS2O96007 188 aaPredicted RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 CHRNGP07510 517 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 CHRM5P08912 532 aaPredicted RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 ZCCHC18P0CG32 403 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 CLUP10909 449 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 HAPLN1P10915 354 aaPredicted RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 MARCKSP29966 332 aaPredicted RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 HNRNPH1P31943 449 aaKnown RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 MMP15P51511 669 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 CLCNKAP51800 687 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 RAD23BP54727 409 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 SLC34A1Q06495 639 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 PNRC1Q12796 327 aaPredicted RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 GAGE2BQ13066 116 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 ICAM4Q14773 271 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 KRT31Q15323 416 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 TRIP6Q15654 476 aaKnown RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 EFNB3Q15768 340 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 SLC36A3Q495N2 470 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 CFAP221Q4G0U5 840 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 GAGE2EQ4V326 116 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 SYT14P1Q58G82 188 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 DCAF6Q58WW2 860 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 MIIPQ5JXC2 388 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 ARHGAP17Q68EM7 881 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 GAGE2AQ6NT46 116 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 RUFY3Q7L099 469 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 ERASQ7Z444 233 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 MRGPREQ86SM8 312 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 AMIGO1Q86WK6 493 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 CHSY1Q86X52 802 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 MARCH9Q86YJ5 346 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 GPSM1Q86YR5 675 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 STHQ8IWL8 128 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 ARHGAP24Q8N264 748 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 PNLDC1Q8NA58 520 aaKnown RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 PROKR1Q8TCW9 393 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 FGF14Q92915 247 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 KRTAP4-12Q9BQ66 201 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 TBCDQ9BTW9 1192 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 MLST8Q9BVC4 326 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 SSBP3Q9BWW4 388 aaPredicted RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 PRRG4Q9BZD6 226 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 TOR3AQ9H497 397 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 VAT1LQ9HCJ6 419 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 YAE1D1Q9NRH1 226 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 MRPL17Q9NRX2 175 aaKnown RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 PHPT1Q9NRX4 125 aaPredicted RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 AURKAIP1Q9NWT8 199 aaPredicted RBP5.38□□□□□ -1.55
VPS53-219ENST00000576019 GAGE2DQ9UEU5 116 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 MGAT4BQ9UQ53 548 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 ENTPD4Q9Y227 616 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 TMED3Q9Y3Q3 217 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 RIPK3Q9Y572 518 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 NME7Q9Y5B8 376 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 SPACA6W5XKT8 324 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 CLUHO75153 1309 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 RAD50Q92878 1312 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 COL6A5A8TX70 2615 aa5.38□□□□□ -1.55
VPS53-219ENST00000576019 CUBNO60494 3623 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 J3KR12 359 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 RPS6KA5O75582 802 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 ATP6AP2O75787 350 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 JTBO76095 146 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 HMBSP08397 361 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 HOXB7P09629 217 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 DRD5P21918 477 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 HLA-FP30511 346 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 ARHGAP25P42331 645 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 CNTN2Q02246 1040 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 PRKAA1Q13131 559 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 TMEM41BQ5BJD5 291 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 ARHGEF16Q5VV41 709 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 AGAP6Q5VW22 663 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 PMF1Q6P1K2 205 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 GRAMD2AQ8IUY3 354 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 MISPQ8IVT2 679 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 RYBPQ8N488 228 aaPredicted RBP5.37□□□□□ -1.55
VPS53-219ENST00000576019 C1orf52Q8N6N3 182 aaKnown RBP5.37□□□□□ -1.55
VPS53-219ENST00000576019 BMPERQ8N8U9 685 aa5.37□□□□□ -1.55
VPS53-219ENST00000576019 TEX45Q8NA69 505 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms