RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 RASSF4Q9H2L5 321 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 TMEM184BQ9Y519 407 aaPredicted RBP22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 MAU2Q9Y6X3 613 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 PCNX2A6NKB5 2137 aa22.72■■□□□ 1.23
ATPAF1-213ENST00000574428 TM4SF5O14894 197 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 CFLARO15519 480 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 CSRP1P21291 193 aaKnown RBP22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 CPN2P22792 545 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 PTPN4P29074 926 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 RPL3P39023 403 aaKnown RBP22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 NUDT2P50583 147 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 ARSFP54793 590 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 SHC2P98077 582 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 MAT1AQ00266 395 aaKnown RBP22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 TNFRSF17Q02223 184 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 SRSF11Q05519 484 aaKnown RBP22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 TLR1Q15399 786 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 DPY19L1Q2PZI1 675 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 C1orf189Q5VU69 101 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 FAM180BQ6P0A1 224 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 SLC2A7Q6PXP3 512 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 RINLQ6ZS11 566 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 FAM47BQ8NA70 645 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 MTERF3Q96E29 417 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 RTKNQ9BST9 563 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 NPLQ9BXD5 320 aaPredicted RBP22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 AKAP7Q9P0M2 348 aaPredicted RBP22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 LOXL2Q9Y4K0 774 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 PCDHA9Q9Y5H5 950 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 BBIP1A8MTZ0 92 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 B2RBV5 119 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 MRASO14807 208 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 DSCR3O14972 297 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 PGRMC2O15173 223 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 CHST10O43529 356 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 SCRG1O75711 98 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 NR2F6P10588 404 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 DRD2P14416 443 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 EFNA1P20827 205 aaPredicted RBP22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 MXRA7P84157 204 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 PLIN5Q00G26 463 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 MC2RQ01718 297 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 IL11RAQ14626 422 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 SYT16Q17RD7 645 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 PAGE3Q5JUK9 113 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 YOD1Q5VVQ6 348 aaPredicted RBP22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 NIPAL1Q6NVV3 410 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 CAMKMTQ7Z624 323 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 ANKRD46Q86W74 232 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 OR8J2Q8NGG1 315 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 COQ8BQ96D53 544 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 DUSP26Q9BV47 211 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 SLC7A5P2Q9GIP4 190 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 CLCA2Q9UQC9 943 aa22.71■■□□□ 1.23
ATPAF1-213ENST00000574428 DYTNA2CJ06 578 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 POLR1CO15160 346 aaPredicted RBP22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 DKK1O94907 266 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 FGF5P12034 268 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 BUD31P41223 144 aaPredicted RBP22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 OR1D4P47884 311 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 MNAT1P51948 309 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 WNT3P56703 355 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 ELF3P78545 371 aaPredicted RBP22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 PMEPA1Q969W9 287 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 UTP4Q969X6 686 aaKnown RBP22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 CIDECQ96AQ7 238 aaPredicted RBP22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 EXOSC8Q96B26 276 aaKnown RBP22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 DEPDC7Q96QD5 511 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 RBCK1Q9BYM8 510 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 EFCAB1Q9HAE3 211 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 LEF1Q9UJU2 399 aaPredicted RBP22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 SRPK3Q9UPE1 567 aa22.7■■□□□ 1.22
ATPAF1-213ENST00000574428 FAM186AA6NE01 2351 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 A0A1B0GX78 115 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 C1orf226A1L170 272 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 FAM227AF5H4B4 570 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 H0YIG0 161 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 TMX2-CTNND1H3BSU7 103 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 CDK4P11802 303 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 ITIH1P19827 911 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 MPEG1Q2M385 716 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 CYB5D1Q6P9G0 228 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 RBM15BQ8NDT2 890 aaKnown RBP22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 MVB12AQ96EY5 273 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 ATAD3AQ9NVI7 634 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 MS4A12Q9NXJ0 267 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 SLC39A1Q9NY26 324 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 SPACA6W5XKT8 324 aa22.69■■□□□ 1.22
ATPAF1-213ENST00000574428 PMS2P1A4D2B8 440 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 ITGAXP20702 1163 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 RAB38P57729 211 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 MAPKAPK3Q16644 382 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 RHBDD2Q6NTF9 364 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 RAB11FIP2Q7L804 512 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 BPHLQ86WA6 291 aaPredicted RBP22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 DSELQ8IZU8 1212 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 SLC38A9Q8NBW4 561 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 BHLHE41Q9C0J9 482 aaPredicted RBP22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 IL1RL2Q9HB29 575 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms