RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
NDE1-209ENST00000574109 PTRH2Q9Y3E5 179 aaKnown RBP12.79□□□□□ -0.36
NDE1-209ENST00000574109 USH1CQ9Y6N9 552 aa12.79□□□□□ -0.36
NDE1-209ENST00000574109 MAP1BP46821 2468 aaKnown RBP12.79□□□□□ -0.36
NDE1-209ENST00000574109 C1orf226A1L170 272 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 IDSB3KWA1 339 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 POLR3GO15318 223 aaPredicted RBP12.78□□□□□ -0.36
NDE1-209ENST00000574109 TMPRSS11DO60235 418 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 CREG1O75629 220 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 KLF7O75840 302 aaPredicted RBP12.78□□□□□ -0.36
NDE1-209ENST00000574109 HEXBP07686 556 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 ANXA4P09525 319 aaPredicted RBP12.78□□□□□ -0.36
NDE1-209ENST00000574109 PRR35P0CG20 571 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 KITP10721 976 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 PRPS2P11908 318 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 DRD2P14416 443 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 LBPP18428 481 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 MMP11P24347 488 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 HNRNPH2P55795 449 aaKnown RBP12.78□□□□□ -0.36
NDE1-209ENST00000574109 TMPRSS3P57727 454 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 OLR1P78380 273 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 KLC1Q07866 573 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 RUNX2Q13950 521 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 SERTAD2Q14140 314 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 SSPNQ14714 243 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 GALNTL6Q49A17 601 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 MINDY4Q4G0A6 757 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 C6orf136Q5SQH8 315 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 MFSD4BQ5TF39 518 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 LCN10Q6JVE6 187 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 NOXRED1Q6NXP6 359 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 SPACA3Q8IXA5 215 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 ACTRT2Q8TDY3 377 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 METTL21AQ8WXB1 218 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 TANKQ92844 425 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 MAELQ96JY0 434 aaKnown RBP12.78□□□□□ -0.36
NDE1-209ENST00000574109 MAPKAP1Q9BPZ7 522 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 TRIM55Q9BYV6 548 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 KCMF1Q9P0J7 381 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 C3orf18Q9UK00 162 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 MKL2Q9ULH7 1088 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 EIF3LQ9Y262 564 aaKnown RBP12.78□□□□□ -0.36
NDE1-209ENST00000574109 ASB4Q9Y574 426 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 PTGDR2Q9Y5Y4 395 aa12.78□□□□□ -0.36
NDE1-209ENST00000574109 A0A1W2PQ72 361 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 CYR61O00622 381 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 SDHDO14521 159 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 PROM1O43490 865 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 PRMT3O60678 531 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 AIFM1O95831 613 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 B3GALT4O96024 378 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 JUNP05412 331 aaKnown RBP12.77□□□□□ -0.37
NDE1-209ENST00000574109 VIMP08670 466 aaKnown RBP12.77□□□□□ -0.37
NDE1-209ENST00000574109 C8orf89P0DMQ9 161 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 AP2B1P63010 937 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 SNRPNP63162 240 aaKnown RBP12.77□□□□□ -0.37
NDE1-209ENST00000574109 EMX2Q04743 252 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 KIAA0040Q15053 153 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 TGIF1Q15583 401 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 UGT8Q16880 541 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 SYT16Q17RD7 645 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 VWA2Q5GFL6 755 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 NDUFAF5Q5TEU4 345 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 SPATA19Q7Z5L4 167 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 VASH2Q86V25 355 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 SCUBE1Q8IWY4 988 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 TMEM132CQ8N3T6 1108 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 FAM47BQ8NA70 645 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 PLPP5Q8NEB5 264 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 CEP70Q8NHQ1 597 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 THAP4Q8WY91 577 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 MTERF3Q96E29 417 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 CHMP6Q96FZ7 201 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 NAF1Q96HR8 494 aaKnown RBP12.77□□□□□ -0.37
NDE1-209ENST00000574109 C3orf30Q96M34 536 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 CATSPER2Q96P56 530 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 SORBS1Q9BX66 1292 aaKnown RBP12.77□□□□□ -0.37
NDE1-209ENST00000574109 VN1R1Q9GZP7 353 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 SOX17Q9H6I2 414 aaPredicted RBP12.77□□□□□ -0.37
NDE1-209ENST00000574109 RPF2Q9H7B2 306 aaKnown RBP12.77□□□□□ -0.37
NDE1-209ENST00000574109 AKIRIN1Q9H9L7 192 aaPredicted RBP12.77□□□□□ -0.37
NDE1-209ENST00000574109 LANCL2Q9NS86 450 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 FAM53CQ9NYF3 392 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 FBXW2Q9UKT8 454 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 PSME2Q9UL46 239 aa12.77□□□□□ -0.37
NDE1-209ENST00000574109 ATP6AP2A0A1C7CYW4 349 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 DIAPH2O60879 1101 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 CNOT3O75175 753 aaKnown RBP12.76□□□□□ -0.37
NDE1-209ENST00000574109 PEX11AO75192 247 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 ALOX12BO75342 701 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 ATP6AP2O75787 350 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 SDC1P18827 310 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 HPCAL1P37235 193 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 EMP2P54851 167 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 RAE1P78406 368 aaKnown RBP12.76□□□□□ -0.37
NDE1-209ENST00000574109 PLIN5Q00G26 463 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 RHAGQ02094 409 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 TLE3Q04726 772 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 CDC20Q12834 499 aa12.76□□□□□ -0.37
NDE1-209ENST00000574109 SLC13A2Q13183 592 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms