RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 LANCL2Q9NS86 450 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 DNAJC11Q9NVH1 559 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 MTRF1LQ9UGC7 380 aaKnown RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 TEKT2Q9UIF3 430 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 ZNF490Q9ULM2 529 aaPredicted RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 NTNG1Q9Y2I2 539 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 ACOT9Q9Y305 439 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 NBASA2RRP1 2371 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 LRIT2A6NDA9 550 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 PSMD12O00232 456 aaPredicted RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 RGS13O14921 159 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 GSC2O15499 205 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 CCNT2O60583 730 aaKnown RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 DNAJA2O60884 412 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 B4GALT2O60909 372 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 C2P06681 752 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 LTA4HP09960 611 aaKnown RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 CTAGE8P0CG41 777 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 SLC35E2BP0CK96 405 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 MYBL2P10244 700 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 TFEBP19484 476 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 GSTM2P28161 218 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 HPDP32754 393 aaPredicted RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 TSFMP43897 325 aaKnown RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 OR4D2P58180 307 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 BTN3A2P78410 334 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 BTG2P78543 158 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 DLG1Q12959 904 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 LAPTM5Q13571 262 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 DOC2AQ14183 400 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 SLMAPQ14BN4 828 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 ABRAXAS2Q15018 415 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 EFTUD2Q15029 972 aaKnown RBP eCLIP6.98□□□□□ -1.29
NUP88-205ENST00000572809 UAP1Q16222 522 aaPredicted RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 EXT1Q16394 746 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 HIST2H2ACQ16777 129 aaPredicted RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 GLE1Q53GS7 698 aaKnown RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 SFT2D3Q587I9 215 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 XKR6Q5GH73 641 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 TOR1AIP1Q5JTV8 583 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 MROH9Q5TGP6 573 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 HIST2H2AA3Q6FI13 130 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 H3F3CQ6NXT2 135 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 VHLLQ6RSH7 139 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 CCDC91Q7Z6B0 441 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 JAZF1Q86VZ6 243 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 CTAGE4Q8IX94 777 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 PDPRQ8NCN5 879 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 SUN3Q8TAQ9 357 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 M1APQ8TC57 530 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 GRHL3Q8TE85 626 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 FAR1Q8WVX9 515 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 IFT81Q8WYA0 676 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 CCT6BQ92526 530 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 NXNL1Q96CM4 212 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 MS4A6EQ96DS6 147 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 PTCD3Q96EY7 689 aaKnown RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 ZNF354BQ96LW1 612 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 MAGEB10Q96LZ2 347 aaPredicted RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 LPAR4Q99677 370 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.98□□□□□ -1.29
NUP88-205ENST00000572809 RHBGQ9H310 441 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 EHD1Q9H4M9 534 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 ALG9Q9H6U8 611 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 KCNK13Q9HB14 408 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 COPG2Q9UBF2 871 aa6.98□□□□□ -1.29
NUP88-205ENST00000572809 FLNBO75369 2602 aaKnown RBP6.98□□□□□ -1.29
NUP88-205ENST00000572809 A0A087X1B8 175 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 TRAV17A0A0B4J275 112 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.97□□□□□ -1.29
NUP88-205ENST00000572809 HMX2A2RU54 273 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 OR5H15A6NDH6 313 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 ANKUB1A6NFN9 424 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 SYCE1LA8MT33 242 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 SUPT3HB4E1H0 165 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 FAM227AF5H4B4 570 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 KIF2AO00139 706 aaPredicted RBP6.97□□□□□ -1.29
NUP88-205ENST00000572809 ERI3O43414 337 aaKnown RBP6.97□□□□□ -1.29
NUP88-205ENST00000572809 PRAMEF4O60810 478 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 SEMA7AO75326 666 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 SUPT3HO75486 399 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 CLEC3AO75596 197 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 AGFG2O95081 481 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 WDPCPO95876 746 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 F10P00742 488 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 RNH1P13489 461 aaKnown RBP6.97□□□□□ -1.29
NUP88-205ENST00000572809 TYK2P29597 1187 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 HNRNPH1P31943 449 aaKnown RBP6.97□□□□□ -1.29
NUP88-205ENST00000572809 CASP2P42575 452 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 TNFSF10P50591 281 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 IRF8Q02556 426 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 ZNF33BQ06732 778 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 CHIT1Q13231 466 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 RUNX2Q13950 521 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 ACAP2Q15057 778 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 PDK4Q16654 411 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 MEP1AQ16819 746 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 FAM83EQ2M2I3 478 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 PAGE2BQ5JRK9 111 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 ACER2Q5QJU3 275 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms