RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ZNF385CQ66K41 422 aaPredicted RBP12.55□□□□□ -0.4
CCDC40-205ENST00000571028 PRMT9Q6P2P2 845 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 PDSS2Q86YH6 399 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 SHISA5Q8N114 240 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 ARHGEF39Q8N4T4 335 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 OR5T3Q8NGG3 340 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 DNAJB14Q8TBM8 379 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 AGAP11Q8TF27 550 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 FAR1Q8WVX9 515 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 MS4A6EQ96DS6 147 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 CMTM7Q96FZ5 175 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 FRG2BQ96QU4 278 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 SH3GL2Q99962 352 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 SORBS1Q9BX66 1292 aaKnown RBP12.55□□□□□ -0.4
CCDC40-205ENST00000571028 RBCK1Q9BYM8 510 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 SOX17Q9H6I2 414 aaPredicted RBP12.55□□□□□ -0.4
CCDC40-205ENST00000571028 COPS7BQ9H9Q2 264 aaPredicted RBP12.55□□□□□ -0.4
CCDC40-205ENST00000571028 TNFRSF12AQ9NP84 129 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 ATP13A2Q9NQ11 1180 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 CTSFQ9UBX1 484 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 SNX6Q9UNH7 406 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 PTRH2Q9Y3E5 179 aaKnown RBP12.55□□□□□ -0.4
CCDC40-205ENST00000571028 LRIT2A6NDA9 550 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 HMGB1P1B2RPK0 211 aaPredicted RBP12.54□□□□□ -0.4
CCDC40-205ENST00000571028 ESRRBO95718 433 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 HSPA4LO95757 839 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 PDYNP01213 254 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 KRT6AP02538 564 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 KRT6BP04259 564 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 ENO1P06733 434 aaKnown RBP12.54□□□□□ -0.4
CCDC40-205ENST00000571028 STSP08842 583 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 GSTM2P28161 218 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 SERPINB1P30740 379 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 KRT6CP48668 564 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 HTR6P50406 440 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 WDR4P57081 412 aaKnown RBP12.54□□□□□ -0.4
CCDC40-205ENST00000571028 OCA2Q04671 838 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 FAM53BQ14153 422 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 RCN2Q14257 317 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 HERC3Q15034 1050 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 ARL13AQ5H913 290 aaPredicted RBP12.54□□□□□ -0.4
CCDC40-205ENST00000571028 KHDRBS2Q5VWX1 349 aaKnown RBP12.54□□□□□ -0.4
CCDC40-205ENST00000571028 CLEC6AQ6EIG7 209 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 TRIM40Q6P9F5 258 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 CHSY3Q70JA7 882 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 COX15Q7KZN9 410 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 TMEM151BQ8IW70 566 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 WDR20Q8TBZ3 569 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 GAL3ST3Q96A11 431 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 MAGEB10Q96LZ2 347 aaPredicted RBP12.54□□□□□ -0.4
CCDC40-205ENST00000571028 CENPKQ9BS16 269 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 MS4A8Q9BY19 250 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 ZNF395Q9H8N7 513 aaPredicted RBP12.54□□□□□ -0.4
CCDC40-205ENST00000571028 DMRT3Q9NQL9 472 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 P4HTMQ9NXG6 502 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 ADGRE2Q9UHX3 823 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 SLC12A4Q9UP95 1085 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 SLC22A7Q9Y694 548 aa12.54□□□□□ -0.4
CCDC40-205ENST00000571028 MDC1Q14676 2089 aaKnown RBP12.53□□□□□ -0.4
CCDC40-205ENST00000571028 ZFHX3Q15911 3703 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 BIRC5O15392 142 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 CHST10O43529 356 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 ITM2AO43736 263 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 NPHS1O60500 1241 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 GALR3O60755 368 aaPredicted RBP12.53□□□□□ -0.4
CCDC40-205ENST00000571028 DIAPH2O60879 1101 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 ULK1O75385 1050 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 JRKO75564 520 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 NSA2O95478 260 aaKnown RBP12.53□□□□□ -0.4
CCDC40-205ENST00000571028 ETHE1O95571 254 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 TBX6O95947 436 aaPredicted RBP12.53□□□□□ -0.4
CCDC40-205ENST00000571028 SERPINE1P05121 402 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 CD63P08962 238 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 DHRS4L1P0CG22 281 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 CHN1P15882 459 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 PTX3P26022 381 aaPredicted RBP12.53□□□□□ -0.4
CCDC40-205ENST00000571028 HTR1EP28566 365 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 PIK3CBP42338 1070 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 SSR2P43308 183 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 TSFMP43897 325 aaKnown RBP12.53□□□□□ -0.4
CCDC40-205ENST00000571028 NAA20P61599 178 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 BTKQ06187 659 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 TGM3Q08188 693 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 STX3Q13277 289 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 ZNF169Q14929 603 aaPredicted RBP12.53□□□□□ -0.4
CCDC40-205ENST00000571028 GGTA1PQ4G0N0 100 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 DEPDC1Q5TB30 811 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 CES4AQ5XG92 561 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 FAAH2Q6GMR7 532 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 OVCH1Q7RTY7 1134 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 AMER3Q8N944 861 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 OR2L5Q8NG80 312 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 MIEF2Q96C03 454 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 MVB12AQ96EY5 273 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 PEX11GQ96HA9 241 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 EML4Q9HC35 981 aaKnown RBP12.53□□□□□ -0.4
CCDC40-205ENST00000571028 ZBTB20Q9HC78 741 aaPredicted RBP12.53□□□□□ -0.4
CCDC40-205ENST00000571028 ENAMQ9NRM1 1142 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 OLAHQ9NV23 265 aa12.53□□□□□ -0.4
CCDC40-205ENST00000571028 ZNF282Q9UDV7 671 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms