RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 RDXP35241 583 aaKnown RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 TSPAN7P41732 249 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 PRKCIP41743 596 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 KLK7P49862 253 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 SULT1E1P49888 294 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 AIF1P55008 147 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 TAS2R40P59535 323 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 RPS3AP61247 264 aaKnown RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 KRT83P78385 493 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 PLIN5Q00G26 463 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 SULT2A1Q06520 285 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 ZNF177Q13360 481 aaPredicted RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 PNLIPRP3Q17RR3 467 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 PTPN20Q4JDL3 420 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 ZNF805Q5CZA5 627 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 MS4A13Q5J8X5 152 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 SPDYCQ5MJ68 293 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 SPECC1LQ69YQ0 1117 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 OR7E24Q6IFN5 339 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 DNAJC24Q6P3W2 148 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 NCEH1Q6PIU2 408 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 PLEKHM3Q6ZWE6 761 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 CHST9Q7L1S5 443 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 TAC4Q86UU9 113 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 MFN1Q8IWA4 741 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 MAP7D3Q8IWC1 876 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 MAML2Q8IZL2 1156 aaPredicted RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 LGI2Q8N0V4 545 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 CARNMT1Q8N4J0 409 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 FRMD1Q8N878 549 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 FIBINQ8TAL6 211 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 SLC44A1Q8WWI5 657 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 ARHGEF2Q92974 986 aaKnown RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 NT5C3BQ969T7 300 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 WBP2Q969T9 261 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 PIWIL1Q96J94 861 aaKnown RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 NAP1L5Q96NT1 182 aaPredicted RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 RPRD1AQ96P16 312 aaPredicted RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 WDFY2Q96P53 400 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 NPY6RQ99463 290 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 GABRG3Q99928 467 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 HAUS4Q9H6D7 363 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 ELOVL2Q9NXB9 296 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 SUN2Q9UH99 717 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 CYTH4Q9UIA0 394 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 LCMT1Q9UIC8 334 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 GGA2Q9UJY4 613 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 HPCAL4Q9UM19 191 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 R4GN57 208 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 MYH10P35580 1976 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 TICRRQ7Z2Z1 1910 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 PATJQ8NI35 1801 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 ZNF638Q14966 1978 aaKnown RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 IGLV5-45A0A087WSX0 123 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 CXorf51AA0A1B0GTR3 108 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 GOLGA6L7A0A1B0GV03 622 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 TCRBV21S2A2A0A5A6 115 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 OR5K3A6NET4 321 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 TMCO5BA8MYB1 307 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 SGK1O00141 431 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 AP5Z1O43299 807 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 LRP3O75074 770 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 RTN2O75298 545 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 RETP07949 1114 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 SRPRAP08240 638 aaKnown RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 CISD3P0C7P0 127 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 TDGF1P13385 188 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 GM2AP17900 193 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 HLA-FP30511 346 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 OR1E1P30953 314 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 AHRP35869 848 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 ARCN1P48444 511 aaKnown RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 CDH4P55283 916 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 GSCP56915 257 aaPredicted RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 GEMIN4P57678 1058 aaKnown RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 RPS24P62847 133 aaKnown RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 EIF4EBP2Q13542 120 aaPredicted RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 CDO1Q16878 200 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 MRGPRG-AS1Q2M3A8 158 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 RAB6CQ53S08 254 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 FAM133BQ5BKY9 247 aaKnown RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 SIRPB2Q5JXA9 342 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 NSUN5P2Q63ZY6 315 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 FBXL22Q6P050 247 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 RFWD3Q6PCD5 774 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 GLDNQ6ZMI3 551 aaPredicted RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 Q75L30 129 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 LPCAT2Q7L5N7 544 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 STRADAQ7RTN6 431 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 RABEPKQ7Z6M1 372 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 SLFN11Q7Z7L1 901 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 SETD3Q86TU7 594 aaPredicted RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 ADIPOR2Q86V24 386 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 MCOLN2Q8IZK6 566 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 CCAR2Q8N163 923 aaKnown RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 ZBTB8BQ8NAP8 495 aaPredicted RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 SLC38A9Q8NBW4 561 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 OR8K1Q8NGG5 319 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 OR52I2Q8NH67 350 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 RXFP2Q8WXD0 754 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms