RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MYLK3Q32MK0 819 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 ACCSLQ4AC99 568 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 ZNF805Q5CZA5 627 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 PMS2CLQ68D20 193 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 PLBD1Q6P4A8 553 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 PACS1Q6VY07 963 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 Q6ZNX1 250 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 CFAP77Q6ZQR2 320 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 SLC29A4Q7RTT9 530 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 TRMT11Q7Z4G4 463 aaKnown RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 SDCCAG8Q86SQ7 713 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 EXOC3L1Q86VI1 746 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 SRRM1Q8IYB3 904 aaKnown RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 RYBPQ8N488 228 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 SLC25A41Q8N5S1 370 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 LPCAT1Q8NF37 534 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 MGARPQ8TDB4 240 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 BLOC1S5Q8TDH9 187 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 DAZAP1Q96EP5 407 aaKnown RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 FER1L6-AS2Q96M78 137 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 LRRC3BQ96PB8 259 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 MYADMQ96S97 322 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 RBBP8Q99708 897 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 IQCGQ9H095 443 aaKnown RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 RHOJQ9H4E5 214 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 POMKQ9H5K3 350 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 ZNF703Q9H7S9 590 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 COPS7BQ9H9Q2 264 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 PLAC1Q9HBJ0 212 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 HPS4Q9NQG7 708 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 INTS10Q9NVR2 710 aaKnown RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 NLE1Q9NVX2 485 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-222ENST00000570139 ELOVL2Q9NXB9 296 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 SUN2Q9UH99 717 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 TBK1Q9UHD2 729 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 APPL1Q9UKG1 709 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 ADAM21Q9UKJ8 722 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 CLEC4EQ9ULY5 219 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 MAU2Q9Y6X3 613 aa6.82□□□□□ -1.32
CNOT1-222ENST00000570139 PDE4DIPQ5VU43 2346 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 RGSL1A5PLK6 1076 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 TRIM49D1C9J1S8 452 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 C1QTNF3-AMACRE9PGA6 284 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 ADAMDEC1O15204 470 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 POLR3GO15318 223 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 STX7O15400 261 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 SMAD6O43541 496 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 GPC4O75487 556 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 ZNF821O75541 412 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 RECQL5O94762 991 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 VAPBO95292 243 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 ERVK-10P10266 1014 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 CYP2A6P11509 494 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 STMN1P16949 149 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 KRT4P19013 534 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 NMBRP28336 390 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 GDI1P31150 447 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 PTGS2P35354 604 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 SLC26A3P40879 764 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 MDH1P40925 334 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 HNF4AP41235 474 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 TNFRSF4P43489 277 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 LEPRP48357 1165 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 ARCN1P48444 511 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 CD151P48509 253 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 TTPAP49638 278 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 CLK1P49759 484 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 CLCN5P51795 746 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 ZNF140P52738 457 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 SLC18A2Q05940 514 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 SLC14A1Q13336 389 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 ELAVL3Q14576 367 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 KPNB1Q14974 876 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 EFTUD2Q15029 972 aaKnown RBP eCLIP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 HNRNPA1L2Q32P51 320 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 SOWAHCQ53LP3 525 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 HSP90AA5PQ58FG0 334 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 LYPLAL1Q5VWZ2 237 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 NEPROQ6NW34 567 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 SHQ1Q6PI26 577 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 GDPD4Q6W3E5 623 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 CERS6Q6ZMG9 384 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 TPRG1Q6ZUI0 275 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 ERN2Q76MJ5 926 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 EPHX4Q8IUS5 362 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 STK40Q8N2I9 435 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 OR13J1Q8NGT2 312 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 DTX3LQ8TDB6 740 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 PDCD6IPQ8WUM4 868 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 DYDC1Q8WWB3 177 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 OR8D1Q8WZ84 308 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 SCRN2Q96FV2 425 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 MCCC1Q96RQ3 725 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 GPR22Q99680 433 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 SELENOSQ9BQE4 189 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 NAA11Q9BSU3 229 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 SLC25A23Q9BV35 468 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 CAPS2Q9BXY5 557 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 TM6SF2Q9BZW4 377 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms