RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 KLHL6Q8WZ60 621 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 PMM1Q92871 262 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 NCLNQ969V3 563 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 SLC45A3Q96JT2 553 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 CLPTM1LQ96KA5 538 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 LRGUKQ96M69 825 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 RNF145Q96MT1 663 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 KCTD14Q9BQ13 255 aaPredicted RBP9.02□□□□□ -0.97
LINC00555-201ENST00000569288 CPPED1Q9BRF8 314 aaPredicted RBP9.02□□□□□ -0.97
LINC00555-201ENST00000569288 THUMPD3Q9BV44 507 aaKnown RBP9.02□□□□□ -0.97
LINC00555-201ENST00000569288 EDEM2Q9BV94 578 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 TMEM38AQ9H6F2 299 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 YY1AP1Q9H869 796 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 PDE7BQ9NP56 450 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 TMEM9BQ9NQ34 198 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 SLC35C2Q9NQQ7 365 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 CCM2LQ9NUG4 571 aaPredicted RBP9.02□□□□□ -0.97
LINC00555-201ENST00000569288 SLC25A37Q9NYZ2 338 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 KCMF1Q9P0J7 381 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 SH3BP4Q9P0V3 963 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 CES1P1Q9UKY3 287 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 CNOT11Q9UKZ1 510 aaKnown RBP9.02□□□□□ -0.97
LINC00555-201ENST00000569288 PADI4Q9UM07 663 aa9.02□□□□□ -0.97
LINC00555-201ENST00000569288 ELOVL7A1L3X0 281 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 MYO1GB0I1T2 1018 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 H0YIG0 161 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 CASQ2O14958 399 aaPredicted RBP9.01□□□□□ -0.97
LINC00555-201ENST00000569288 HNRNPRO43390 633 aaKnown RBP9.01□□□□□ -0.97
LINC00555-201ENST00000569288 B3GALT2O43825 422 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 DPM1O60762 260 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 BMP10O95393 424 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 GUSBP08236 651 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 IL3P08700 152 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 GGT1P19440 569 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 CDH3P22223 829 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 GALNSP34059 522 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 ATXN3P54252 364 aaPredicted RBP9.01□□□□□ -0.97
LINC00555-201ENST00000569288 HSD11B2P80365 405 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 SLAMF1Q13291 335 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 CCNIQ14094 377 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 NR0B2Q15466 257 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 CCDC6Q16204 474 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 HKDC1Q2TB90 917 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 HLA-BQ31612 363 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 TOR1AIP1Q5JTV8 583 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 TMTC4Q5T4D3 741 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 PRAMEF8Q5VWM4 474 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 PRAMEF7Q5VXH5 474 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 FBXW10Q5XX13 1052 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 OR4F3Q6IEY1 312 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 TCEAL6Q6IPX3 200 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 ADNP2Q6IQ32 1131 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 SLC48A1Q6P1K1 146 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 TMEM71Q6P5X7 295 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 USP53Q70EK8 1073 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 TICAM1Q8IUC6 712 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 MSRB3Q8IXL7 192 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 D2HGDHQ8N465 521 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 RNF175Q8N4F7 328 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 ARHGEF39Q8N4T4 335 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 CATSPER1Q8NEC5 780 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 OR2T12Q8NG77 320 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 OR52N2Q8NGI0 321 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 SFXN5Q8TD22 340 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 ZFP90Q8TF47 636 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 PATE1Q8WXA2 126 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 TCEAL3Q969E4 200 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 SLC41A2Q96JW4 573 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 FCRL4Q96PJ5 515 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 TEFMQ96QE5 360 aaKnown RBP9.01□□□□□ -0.97
LINC00555-201ENST00000569288 OSBPL10Q9BXB5 764 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 SMOC1Q9H4F8 434 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 MAGIXQ9H6Y5 334 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 GAREM1Q9H706 876 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 COPS7BQ9H9Q2 264 aaPredicted RBP9.01□□□□□ -0.97
LINC00555-201ENST00000569288 TPT1P8Q9HAU6 139 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 RYDENQ9NUL5 291 aaKnown RBP9.01□□□□□ -0.97
LINC00555-201ENST00000569288 GIMAP4Q9NUV9 329 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 SLAMF8Q9P0V8 285 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 CDC14AQ9UNH5 594 aa9.01□□□□□ -0.97
LINC00555-201ENST00000569288 TTC36A6NLP5 189 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 PLOD2O00469 737 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 TM4SF5O14894 197 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 AKAP10O43572 662 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 TMPRSS11DO60235 418 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 GALR3O60755 368 aaPredicted RBP9□□□□□ -0.97
LINC00555-201ENST00000569288 NSA2O95478 260 aaKnown RBP9□□□□□ -0.97
LINC00555-201ENST00000569288 ONECUT2O95948 504 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 AGR2O95994 175 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 IFNA14P01570 189 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 GP1BAP07359 652 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 CKMT1AP12532 417 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 CSNK2A2P19784 350 aaPredicted RBP9□□□□□ -0.97
LINC00555-201ENST00000569288 GABRA4P48169 554 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 LSSP48449 732 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 PLA2G16P53816 162 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 ARSFP54793 590 aa9□□□□□ -0.97
LINC00555-201ENST00000569288 MANFP55145 182 aaKnown RBP9□□□□□ -0.97
LINC00555-201ENST00000569288 MAZP56270 477 aaKnown RBP9□□□□□ -0.97
LINC00555-201ENST00000569288 TRA2AQ13595 282 aaKnown RBP eCLIP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms