RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CAMLGP49069 296 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 NAGLUP54802 743 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 SNU13P55769 128 aaKnown RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 SLC26A5P58743 744 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 KIAA1024LP59773 190 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 PTENP60484 403 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 ST8SIA6P61647 398 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 DMP1Q13316 513 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 RBM39Q14498 530 aaKnown RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 KRT33BQ14525 404 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 PTPRCAPQ14761 206 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 NONOQ15233 471 aaKnown RBP eCLIP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 UGCGQ16739 394 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 PNLIPRP3Q17RR3 467 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM98BQ52LJ0 330 aaKnown RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 TMEM35AQ53FP2 167 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 LBHQ53QV2 105 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 SIRPB2Q5JXA9 342 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 SHEQ5VZ18 495 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 TCEAL6Q6IPX3 200 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 TMEM182Q6ZP80 229 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 Q75L30 129 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 CDR2LQ86X02 465 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 PLA2G4DQ86XP0 818 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 KLHDC8BQ8IXV7 354 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 RASGEF1CQ8N431 466 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 LPCAT1Q8NF37 534 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 OR1J2Q8NGS2 313 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 OR52I2Q8NH67 350 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 HM13Q8TCT9 377 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 SLC13A3Q8WWT9 602 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 ROBO4Q8WZ75 1007 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 BCL2L2Q92843 193 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 FGF13Q92913 245 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 TCEAL3Q969E4 200 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 ST6GALNAC6Q969X2 333 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 SYAP1Q96A49 352 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 SPSB1Q96BD6 273 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 SPACA9Q96E40 222 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 LINGO1Q96FE5 620 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 LRRC3BQ96PB8 259 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 RUFY1Q96T51 708 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 OLFM1Q99784 485 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 INPP5KQ9BT40 448 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 LRRC1Q9BTT6 524 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 OSBPL8Q9BZF1 889 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 CXCL16Q9H2A7 254 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 LMAN1LQ9HAT1 526 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 EPB41L5Q9HCM4 733 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZNF334Q9HCZ1 680 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 MRPL17Q9NRX2 175 aaKnown RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 DNAJC17Q9NVM6 304 aaKnown RBP3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 MARCH5Q9NX47 278 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 TAS2R14Q9NYV8 317 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 STK39Q9UEW8 545 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 IL17BQ9UHF5 180 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 SLC24A2Q9UI40 661 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 FBXL5Q9UKA1 691 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 ITGA11Q9UKX5 1188 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 RAB23Q9ULC3 237 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 CHKBQ9Y259 395 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 HES2Q9Y543 173 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 CHD6Q8TD26 2715 aa3.1□□□□□ -1.91
HMGB1P6-201ENST00000569046 PLXNB3Q9ULL4 1909 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ASPMQ8IZT6 3477 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 WDFY3Q8IZQ1 3526 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 IGKV6D-21A0A0A0MT36 114 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 FEZF1A0PJY2 475 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ERICH2A1L162 156 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 C5orf51A6NDU8 294 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 OR5K3A6NET4 321 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 C5orf52A6NGY3 159 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 E7EWF7 191 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 SMAD9O15198 467 aaKnown RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ADAM12O43184 909 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 PLPP2O43688 288 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 SELENOFO60613 162 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 LETM1O95202 739 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 TRIM16O95361 564 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 PAK4O96013 591 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ALPPP05187 535 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 VIMP08670 466 aaKnown RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 CALM1P0DP23 149 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 CALM2P0DP24 149 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 CALM3P0DP25 149 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ALPPL2P10696 532 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 VPREB1P12018 145 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 DARSP14868 501 aaKnown RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 EPORP19235 508 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ITIH1P19827 911 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 CDC25CP30307 473 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ARCN1P48444 511 aaKnown RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ATXN3P54252 364 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 EEF1A1P68104 462 aaKnown RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 SIRPAP78324 504 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 GFPT1Q06210 699 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 GIT2Q14161 759 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 SGCBQ16585 318 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZNF528Q3MIS6 628 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 EEF1A1P5Q5VTE0 462 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms