RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 VN1R1Q9GZP7 353 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 AKTIPQ9H8T0 292 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 SEMA3GQ9NS98 782 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 GIMAP2Q9UG22 337 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 MRPS33Q9Y291 106 aaKnown RBP15.77■□□□□ 0.12
COMMD4-224ENST00000568877 TMED5Q9Y3A6 229 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 POLR3HQ9Y535 204 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-224ENST00000568877 USH1CQ9Y6N9 552 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 OR2W5A6NFC9 320 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 ZNF891A8MT65 544 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-224ENST00000568877 CLDN4O14493 209 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 ZNF195O14628 629 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 EDF1O60869 148 aaKnown RBP15.76■□□□□ 0.11
COMMD4-224ENST00000568877 GUCY1B2O75343 617 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 VPS4BO75351 444 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 IGHEP01854 428 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 CYC1P08574 325 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 HNRNPFP52597 415 aaKnown RBP15.76■□□□□ 0.11
COMMD4-224ENST00000568877 EFNA3P52797 238 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 UCNP55089 124 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 RPL38P63173 70 aaKnown RBP15.76■□□□□ 0.11
COMMD4-224ENST00000568877 MC1RQ01726 317 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 RHAGQ02094 409 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 TNFRSF17Q02223 184 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 IL10RAQ13651 578 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 C6orf136Q5SQH8 315 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 C18orf63Q68DL7 685 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 ZNF595Q8IYB9 648 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 ZSCAN1Q8NBB4 408 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 TMEM52Q8NDY8 209 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 PLPP5Q8NEB5 264 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 TM4SF18Q96CE8 201 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 FCRL1Q96LA6 429 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 CNTNAP3BQ96NU0 1288 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 CNTNAP3Q9BZ76 1288 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 TEX10Q9NXF1 929 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-224ENST00000568877 FAM53CQ9NYF3 392 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 ZMIZ1Q9ULJ6 1067 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 AHCTF1Q8WYP5 2266 aa15.76■□□□□ 0.11
COMMD4-224ENST00000568877 SEC16AO15027 2179 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 BLACEA4D250 179 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 SDHDO14521 159 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 NKX2-8O15522 239 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 PRMT3O60678 531 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 AIFM1O95831 613 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 PRR35P0CG20 571 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 NR2F6P10588 404 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 MMP11P24347 488 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 OTX2P32243 289 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 GSTM5P46439 218 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 HSD17B7P56937 341 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 TAS2R50P59544 299 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 BTG2P78543 158 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 UGT8Q16880 541 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 SMU1Q2TAY7 513 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 CRTC2Q53ET0 693 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-224ENST00000568877 NDUFAF5Q5TEU4 345 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 VWA5B1Q5TIE3 1220 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 QSOX2Q6ZRP7 698 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 MAVSQ7Z434 540 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 RAB43Q86YS6 212 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 FNDC5Q8NAU1 212 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 C16orf78Q8WTQ4 265 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 METTL21AQ8WXB1 218 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 TANKQ92844 425 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 NACC2Q96BF6 587 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 PTCHD1Q96NR3 888 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 RPF2Q9H7B2 306 aaKnown RBP15.75■□□□□ 0.11
COMMD4-224ENST00000568877 WDR41Q9HAD4 459 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 PRDM9Q9NQV7 894 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 PRTFDC1Q9NRG1 225 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 DLGAP4Q9Y2H0 992 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 MMACHCQ9Y4U1 282 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 DMXL2Q8TDJ6 3036 aa15.75■□□□□ 0.11
COMMD4-224ENST00000568877 CTNSO60931 367 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 ALOX12BO75342 701 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 PRKRAO75569 313 aaKnown RBP15.74■□□□□ 0.11
COMMD4-224ENST00000568877 TGDSO95455 350 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 VIMP08670 466 aaKnown RBP15.74■□□□□ 0.11
COMMD4-224ENST00000568877 C8orf89P0DMQ9 161 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 ACPPP15309 386 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 ALOX15P16050 662 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-224ENST00000568877 MAPK1P28482 360 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 TMPRSS3P57727 454 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 EMX2Q04743 252 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 ZNF763Q0D2J5 394 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 SLC13A2Q13183 592 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 SLC9B1Q4ZJI4 515 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 FAAH2Q6GMR7 532 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 TMEM205Q6UW68 189 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 LARP4Q71RC2 724 aaKnown RBP eCLIP15.74■□□□□ 0.11
COMMD4-224ENST00000568877 PPP1R32Q7Z5V6 425 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 SCUBE1Q8IWY4 988 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 LRRC34Q8IZ02 419 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 ADAMTS17Q8TE56 1095 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 MAELQ96JY0 434 aaKnown RBP15.74■□□□□ 0.11
COMMD4-224ENST00000568877 FAIM2Q9BWQ8 316 aa15.74■□□□□ 0.11
COMMD4-224ENST00000568877 WDR55Q9H6Y2 383 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-224ENST00000568877 WBP11Q9Y2W2 641 aaKnown RBP15.74■□□□□ 0.11
COMMD4-224ENST00000568877 PCDHA9Q9Y5H5 950 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms