RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ADPRMQ3LIE5 342 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 ABHD17CQ6PCB6 329 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 PAOXQ6QHF9 649 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 ACAD11Q709F0 780 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 GPALPP1Q8IXQ4 340 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 KRT78Q8N1N4 520 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 TMEM132CQ8N3T6 1108 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 TMEM251Q8N6I4 163 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 SNX31Q8N9S9 440 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 SLCO2A1Q92959 643 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 SERINC2Q96SA4 455 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 ALOXE3Q9BYJ1 711 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 TRIM31Q9BZY9 425 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 CAB39LQ9H9S4 337 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 SEMA4BQ9NPR2 832 aaPredicted RBP14.38□□□□□ -0.11
NME3-211ENST00000568561 WWOXQ9NZC7 414 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 ZNF490Q9ULM2 529 aaPredicted RBP14.38□□□□□ -0.11
NME3-211ENST00000568561 NAV3Q8IVL0 2385 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 FREM3P0C091 2139 aa14.38□□□□□ -0.11
NME3-211ENST00000568561 PRRC2AP48634 2157 aaKnown RBP14.37□□□□□ -0.11
NME3-211ENST00000568561 ZNF469Q96JG9 3925 aaPredicted RBP14.37□□□□□ -0.11
NME3-211ENST00000568561 A0A088AWK7 358 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 ATP6AP2A0A1C7CYW4 349 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 FOXO6A8MYZ6 492 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 C17orf105B2RV13 164 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 RTCAO00442 366 aaKnown RBP14.37□□□□□ -0.11
NME3-211ENST00000568561 CLGNO14967 610 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 CTNSO60931 367 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 ATP6AP2O75787 350 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 CCL3P10147 92 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 TNNI3P19429 210 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 CD22P20273 847 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 ZNF10P21506 573 aaPredicted RBP14.37□□□□□ -0.11
NME3-211ENST00000568561 HSPA7P48741 367 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 MTTPP55157 894 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 RNF4P78317 190 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 PDIA2Q13087 525 aaKnown RBP14.37□□□□□ -0.11
NME3-211ENST00000568561 SNTB1Q13884 538 aaKnown RBP14.37□□□□□ -0.11
NME3-211ENST00000568561 DOC2AQ14183 400 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 TGFBIQ15582 683 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 RTL6Q6ICC9 239 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 ZNF793Q6ZN11 406 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 RTL4Q6ZR62 310 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 GK5Q6ZS86 529 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 FAM47EQ6ZV65 393 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 SLC22A16Q86VW1 577 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 FBXO36Q8NEA4 188 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 OR14A16Q8NHC5 309 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 SLC2A12Q8TD20 617 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 ANKRD7Q92527 254 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 EXT2Q93063 718 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 VPS39Q96JC1 886 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 MAPKAP1Q9BPZ7 522 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 FAM173AQ9BQD7 235 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 TTYH2Q9BSA4 534 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 CNPPD1Q9BV87 410 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 SMYD2Q9NRG4 433 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 DNAJC11Q9NVH1 559 aa14.37□□□□□ -0.11
NME3-211ENST00000568561 TUBA8Q9NY65 449 aaPredicted RBP14.37□□□□□ -0.11
NME3-211ENST00000568561 FLNAP21333 2647 aaKnown RBP14.36□□□□□ -0.11
NME3-211ENST00000568561 A0A0G2JNJ9 132 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 PHGDHO43175 533 aaKnown RBP14.36□□□□□ -0.11
NME3-211ENST00000568561 ETHE1O95571 254 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 HOXD4P09016 255 aaPredicted RBP14.36□□□□□ -0.11
NME3-211ENST00000568561 GLI4P10075 376 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 DNAJA1P31689 397 aaKnown RBP14.36□□□□□ -0.11
NME3-211ENST00000568561 GMPRP36959 345 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 PIGAP37287 484 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 ADH7P40394 386 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 ARL4CP56559 192 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 FRG1Q14331 258 aaKnown RBP14.36□□□□□ -0.11
NME3-211ENST00000568561 OR4D1Q15615 310 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 TRILQ7L0X0 811 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 UBE3DQ7Z6J8 389 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 LIX1LQ8IVB5 337 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 FAM109AQ8N4B1 249 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 MORN4Q8NDC4 146 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 DOK4Q8TEW6 326 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 DAZLQ92904 295 aaKnown RBP14.36□□□□□ -0.11
NME3-211ENST00000568561 LRRC39Q96DD0 335 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 RUNDC3BQ96NL0 473 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 RHOJQ9H4E5 214 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 NT5DC2Q9H857 520 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 PRM3Q9NNZ6 103 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 PRDM7Q9NQW5 492 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 GPRC5BQ9NZH0 403 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 VTI1BQ9UEU0 232 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 Q9UFV3 132 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 KCNN3Q9UGI6 736 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 MTO1Q9Y2Z2 717 aaKnown RBP14.36□□□□□ -0.11
NME3-211ENST00000568561 NINQ8N4C6 2090 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 ABCA4P78363 2273 aa14.36□□□□□ -0.11
NME3-211ENST00000568561 NIPBLQ6KC79 2804 aaeCLIP14.35□□□□□ -0.11
NME3-211ENST00000568561 FIGNL2A6NMB9 653 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 CES2O00748 559 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 TP73O15350 636 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 KLK8O60259 260 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 ZWINTO95229 277 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 WISP3O95389 354 aaPredicted RBP14.35□□□□□ -0.11
NME3-211ENST00000568561 NADKO95544 446 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms