RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ZNF473Q8WTR7 871 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 THAP3Q8WTV1 239 aaPredicted RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 KCTD4Q8WVF5 259 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SLC44A1Q8WWI5 657 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 IFT81Q8WYA0 676 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ZNF592Q92610 1267 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 RELTQ969Z4 430 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ISL2Q96A47 359 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 TMEM125Q96AQ2 219 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 NXNL1Q96CM4 212 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 MRRFQ96E11 262 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 CMTM7Q96FZ5 175 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 VMP1Q96GC9 406 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 F2RL3Q96RI0 385 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 FMO2Q99518 471 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 CCDC77Q9BR77 488 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 CENPKQ9BS16 269 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 TBCDQ9BTW9 1192 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 MS4A8Q9BY19 250 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 FUT8Q9BYC5 575 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 HES7Q9BYE0 225 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 DEFB126Q9BYW3 111 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 CDC42EP4Q9H3Q1 356 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 ACSS3Q9H6R3 686 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 TRIM45Q9H8W5 580 aaPredicted RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 LYRM4Q9HD34 91 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ADAP2Q9NPF8 381 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 PRDM7Q9NQW5 492 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 KLHL1Q9NR64 748 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SNX15Q9NRS6 342 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ANKRD10Q9NXR5 420 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 NINJ2Q9NZG7 142 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 KCMF1Q9P0J7 381 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 LRFN1Q9P244 771 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SEC14L3Q9UDX4 400 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 VTI1BQ9UEU0 232 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 DMGDHQ9UI17 866 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 TMCO1Q9UM00 188 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 PPIEQ9UNP9 301 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 TSC22D4Q9Y3Q8 395 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ASB1Q9Y576 335 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 ANGPTL3Q9Y5C1 460 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 PCDHGA11Q9Y5H2 935 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 CLDN16Q9Y5I7 305 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 TNPO3Q9Y5L0 923 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 IKBKGQ9Y6K9 419 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SPACA6W5XKT8 324 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 POLEQ07864 2286 aa4.47□□□□□ -1.69
CLK3-219ENST00000567805 SPTBN1Q01082 2364 aaKnown RBP4.47□□□□□ -1.69
CLK3-219ENST00000567805 DIDO1Q9BTC0 2240 aaKnown RBP4.46□□□□□ -1.69
CLK3-219ENST00000567805 MAST4O15021 2626 aa4.46□□□□□ -1.69
CLK3-219ENST00000567805 SPTAN1Q13813 2472 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 DOPEY1Q5JWR5 2465 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 NCOA6Q14686 2063 aaPredicted RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 EXPH5Q8NEV8 1989 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 TRBV11-1A0A0K0K1C0 115 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 A8MUA0 341 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 H0YIV9 168 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 TGFBR3LH3BV60 316 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 PLPP1O14494 284 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 NME2P1O60361 137 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 SLC19A2O60779 497 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CTNSO60931 367 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ITGA10O75578 1167 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 SLC25A12O75746 678 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 KRT38O76015 456 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ZFAND5O76080 213 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ACSL3O95573 720 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 TGFB1P01137 390 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 IFNA16P05015 189 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 INHBAP08476 426 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 RBP1P09455 135 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CTAGE8P0CG41 777 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 COL6A2P12110 1019 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 NME2P22392 152 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 LORP23490 312 aaPredicted RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 ECHS1P30084 290 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 PPP2R1BP30154 601 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CA7P43166 264 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 SSR2P43308 183 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 MAGEA12P43365 314 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 SMCPP49901 116 aaPredicted RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 SERPINB9P50453 376 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ST13P50502 369 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 HLCSP50747 726 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 GPR143P51810 404 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 RAP1GDS1P52306 607 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CASP6P55212 293 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 PHEXP78562 749 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ALDH6A1Q02252 535 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 STX4Q12846 297 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 BIKQ13323 160 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 GTF2H2Q13888 395 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 PCBP2Q15366 365 aaKnown RBP eCLIP4.46□□□□□ -1.7
CLK3-219ENST00000567805 ZRSR2Q15696 482 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 MAPKAPK3Q16644 382 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 TSNAXIP1Q2TAA8 658 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 AP5B1Q2VPB7 878 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 KRTCAP3Q53RY4 240 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 TECRLQ5HYJ1 363 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms