RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	OR1F1	O43749	312 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	ZBTB14	O43829	449 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	TRAPPC6A	O75865	159 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	CDH1	P12830	882 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	SKIV2L2	P42285	1042 aa	Known RBP	12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	MARCKSL1	P49006	195 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	SLC13A2	Q13183	592 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	BHLHB9	Q6PI77	547 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	CAND1	Q86VP6	1230 aa	Known RBP	12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	SCUBE1	Q8IWY4	988 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	CA13	Q8N1Q1	262 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	TBC1D19	Q8N5T2	526 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	TC2N	Q8N9U0	490 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	FAM71D	Q8N9W8	422 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	UTP15	Q8TED0	518 aa	Known RBP	12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	DAZL	Q92904	295 aa	Known RBP	12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	IQCD	Q96DY2	449 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	ZFP3	Q96NJ6	502 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	BIRC8	Q96P09	236 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	PRTFDC1	Q9NRG1	225 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	PSD3	Q9NYI0	1048 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	TCAF1	Q9Y4C2	921 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737	ABCA1	O95477	2261 aa		12.61	□□□□□ -0.39
SMG1-213	ENST00000567737		A8MXE2	369 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	PJA2	O43164	708 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	AKR1B10	O60218	316 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	ZNF354A	O60765	605 aa	Predicted RBP	12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	IFNA16	P05015	189 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	THBS2	P35442	1172 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	IDUA	P35475	653 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	HSD17B7	P56937	341 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	RAB8A	P61006	207 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	RNF4	P78317	190 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	ELAVL1	Q15717	326 aa	Known RBP	12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	TTLL9	Q3SXZ7	439 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	VASN	Q6EMK4	673 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	VASH1	Q7L8A9	365 aa	Predicted RBP	12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	MORN4	Q8NDC4	146 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	OR8K3	Q8NH51	312 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	NT5C	Q8TCD5	201 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	PAQR8	Q8TEZ7	354 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	ALKBH8	Q96BT7	664 aa	Known RBP	12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	TM9SF2	Q99805	663 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	PIGQ	Q9BRB3	760 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	NAT10	Q9H0A0	1025 aa	Known RBP	12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	ACBD3	Q9H3P7	528 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	HOMER3	Q9NSC5	361 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	LPAR3	Q9UBY5	353 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	PACSIN3	Q9UKS6	424 aa		12.6	□□□□□ -0.39
SMG1-213	ENST00000567737	RAI1	Q7Z5J4	1906 aa	Predicted RBP	12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	SYNDIG1L	A6NDD5	238 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	ERI2	A8K979	691 aa	Known RBP	12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	SMTNL1	A8MU46	457 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	PFDN6	O15212	129 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	NRDC	O43847	1150 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	ESR1	P03372	595 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	SOX18	P35713	384 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	HNF4A	P41235	474 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	CCR8	P51685	355 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	CCZ1B	P86790	482 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	CCZ1	P86791	482 aa	Predicted RBP	12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	SRSF2	Q01130	221 aa	Known RBP	12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	OCRL	Q01968	901 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	FAM27E3	Q08E93	113 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	ASTE1	Q2TB18	679 aa	Predicted RBP	12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	C6orf52	Q5T4I8	152 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	SLC22A8	Q8TCC7	542 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	ASB11	Q8WXH4	323 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	INTS12	Q96CB8	462 aa	Known RBP	12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	WDYHV1	Q96HA8	205 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	ZNF597	Q96LX8	424 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	FAM111A	Q96PZ2	611 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	DOHH	Q9BU89	302 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	OR8D2	Q9GZM6	311 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	GOLPH3	Q9H4A6	298 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	SH2D2A	Q9NP31	389 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	CNIH4	Q9P003	139 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	GALP	Q9UBC7	116 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	EFR3B	Q9Y2G0	817 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	SLC6A5	Q9Y345	797 aa		12.59	□□□□□ -0.39
SMG1-213	ENST00000567737	TRBC2	A0A5B9	178 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	TGFBR3L	H3BV60	316 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	GFY	I3L273	518 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	RCBTB2	O95199	551 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	C1QA	P02745	245 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	MPC1L	P0DKB6	136 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	CYP4B1	P13584	511 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	RPL21	P46778	160 aa	Known RBP	12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	EEF1A1	P68104	462 aa	Known RBP	12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	ASPH	Q12797	758 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	MPEG1	Q2M385	716 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	ZNF791	Q3KP31	576 aa	Predicted RBP	12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	PIGG	Q5H8A4	983 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	NHSL2	Q5HYW2	709 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	EEF1A1P5	Q5VTE0	462 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	UBE2R2	Q712K3	238 aa	Predicted RBP	12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	PRELID2	Q8N945	189 aa		12.58	□□□□□ -0.4
SMG1-213	ENST00000567737	OR14A16	Q8NHC5	309 aa		12.58	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms