RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 GBP7Q8N8V2 638 aaPredicted RBP11.65□□□□□ -0.54
RNF40-211ENST00000567365 FDCSPQ8NFU4 85 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 CHTF18Q8WVB6 975 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 ARL8AQ96BM9 186 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 CENPKQ9BS16 269 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 NUDT9Q9BW91 350 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 MRPL1Q9BYD6 325 aaKnown RBP11.65□□□□□ -0.54
RNF40-211ENST00000567365 ACPTQ9BZG2 426 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 CENPHQ9H3R5 247 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 ZNF552Q9H707 407 aaPredicted RBP11.65□□□□□ -0.54
RNF40-211ENST00000567365 VIPAS39Q9H9C1 493 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 COPS7BQ9H9Q2 264 aaPredicted RBP11.65□□□□□ -0.54
RNF40-211ENST00000567365 ATP13A2Q9NQ11 1180 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 SIRT5Q9NXA8 310 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 ATG4BQ9Y4P1 393 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 ZNF462Q96JM2 2506 aa11.65□□□□□ -0.54
RNF40-211ENST00000567365 CPAMD8Q8IZJ3 1885 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 IGHV3-20A0A0C4DH32 117 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 A0A1W2PR48 441 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 PSMD12O00232 456 aaPredicted RBP11.64□□□□□ -0.55
RNF40-211ENST00000567365 PROM1O43490 865 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 CTNSO60931 367 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 CELA2AP08217 269 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 UROSP10746 265 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 MAOAP21397 527 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 SERPINB3P29508 390 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 HMOX2P30519 316 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 SERPINB5P36952 375 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 CCL11P51671 97 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 RAP1GDS1P52306 607 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 MAGOHP61326 146 aaKnown RBP11.64□□□□□ -0.55
RNF40-211ENST00000567365 RAE1P78406 368 aaKnown RBP11.64□□□□□ -0.55
RNF40-211ENST00000567365 TNFRSF17Q02223 184 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 RCN2Q14257 317 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 NSDHLQ15738 373 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 CFAP157Q5JU67 520 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 KANK2Q63ZY3 851 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 PLAG1Q6DJT9 500 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 GALNT18Q6P9A2 607 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 IGFL2Q6UWQ7 119 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 COMMD6Q7Z4G1 85 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 ZNF605Q86T29 641 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 CUZD1Q86UP6 607 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 GPR180Q86V85 440 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 NUDT13Q86X67 352 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 FAM47BQ8NA70 645 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 CLEC1AQ8NC01 280 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 NFAM1Q8NET5 270 aaPredicted RBP11.64□□□□□ -0.55
RNF40-211ENST00000567365 METTL21AQ8WXB1 218 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 ANKRD9Q96BM1 317 aaPredicted RBP11.64□□□□□ -0.55
RNF40-211ENST00000567365 VPS50Q96JG6 964 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 PKNOX2Q96KN3 472 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 PTCHD1Q96NR3 888 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 SMAD5Q99717 465 aaKnown RBP11.64□□□□□ -0.55
RNF40-211ENST00000567365 TUBB6Q9BUF5 446 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 STMN4Q9H169 189 aaPredicted RBP11.64□□□□□ -0.55
RNF40-211ENST00000567365 TUBB1Q9H4B7 451 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 ZNF160Q9HCG1 818 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 PRTFDC1Q9NRG1 225 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 RIC8BQ9NVN3 520 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 LYARQ9NX58 379 aaKnown RBP11.64□□□□□ -0.55
RNF40-211ENST00000567365 VPS29Q9UBQ0 182 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 C19orf25Q9UFG5 118 aaPredicted RBP11.64□□□□□ -0.55
RNF40-211ENST00000567365 PPIEQ9UNP9 301 aaKnown RBP11.64□□□□□ -0.55
RNF40-211ENST00000567365 SLC12A4Q9UP95 1085 aa11.64□□□□□ -0.55
RNF40-211ENST00000567365 NSG1A0A0A6YYJ2 146 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 TMEM120BA0PK00 339 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 BLACEA4D250 179 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 MKRN2OSH3BPM6 223 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 PYCARD-AS1I3L0S3 204 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 SASH3O75995 380 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 SEC24DO94855 1032 aaPredicted RBP11.63□□□□□ -0.55
RNF40-211ENST00000567365 SERPINA7P05543 415 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 FAM58BPP0C7Q3 252 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 PRR35P0CG20 571 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 SFTPCP11686 197 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 PRPH2P23942 346 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 GPR143P51810 404 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 HMGCS1Q01581 520 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 KIAA0040Q15053 153 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 SFT2D3Q587I9 215 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 C18orf63Q68DL7 685 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 CLEC6AQ6EIG7 209 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 PAPD4Q6PIY7 484 aaKnown RBP11.63□□□□□ -0.55
RNF40-211ENST00000567365 RIPOR1Q6ZS17 1223 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 Q6ZSR9 355 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 C9orf43Q8TAL5 461 aaPredicted RBP11.63□□□□□ -0.55
RNF40-211ENST00000567365 APIPQ96GX9 242 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 ARHGAP9Q9BRR9 750 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 SLC25A23Q9BV35 468 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 SHCBP1LQ9BZQ2 653 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 C20orf27Q9GZN8 174 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 SLC25A18Q9H1K4 315 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 TEX10Q9NXF1 929 aaPredicted RBP11.63□□□□□ -0.55
RNF40-211ENST00000567365 MS4A12Q9NXJ0 267 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 AHSPQ9NZD4 102 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 PHF11Q9UIL8 331 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 HAO1Q9UJM8 370 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 FBXW2Q9UKT8 454 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 MRPS33Q9Y291 106 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms