RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 RTL4Q6ZR62 310 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 PRSS42Q7Z5A4 293 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 VN1R5Q7Z5H4 357 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 OR6S1Q8NH40 331 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 PCDH19Q8TAB3 1148 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 LHFPL5Q8TAF8 219 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ZNF778Q96MU6 729 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ZNF641Q96N77 438 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 HHIPQ96QV1 700 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 OR5B12Q96R08 314 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 C12orf65Q9H3J6 166 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 SFXN1Q9H9B4 322 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 SMCO4Q9NRQ5 59 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 DNMT3BQ9UBC3 853 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 PCDHB3Q9Y5E6 796 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 A0A0D9SEW6 157 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ELOVL7A1L3X0 281 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 CAPN14A8MX76 684 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 PITPNM1O00562 1244 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 PRH1P02810 166 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 FUCA1P04066 466 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 PTPN6P29350 595 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 GPC1P35052 558 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 KCNJ5P48544 419 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 SPOCK1Q08629 439 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 GRIN2CQ14957 1233 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ARMC12Q5T9G4 340 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 TXNRD3NBQ6F5E7 133 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 SLC25A25Q6KCM7 469 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 FBXL19Q6PCT2 694 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 RNF130Q86XS8 419 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 FTMTQ8N4E7 242 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 HERVK_113Q902F9 699 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 NTPCRQ9BSD7 190 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 FEM1AQ9BSK4 669 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 RERGLQ9H628 205 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 CARS2Q9HA77 564 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 C19orf12Q9NSK7 152 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ERVK-19Q9WJR5 959 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 CLEC3AO75596 197 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ARL6IP5O75915 188 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 STAU1O95793 577 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 IFNA2P01563 188 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 CYP4B1P13584 511 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 DHPSP49366 369 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 SMUG1Q53HV7 270 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 C6orf141Q5SZD1 244 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ZNF529Q6P280 563 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 FAM111BQ6SJ93 734 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 KDELC1Q6UW63 502 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 C3P1Q6ZMU1 363 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 UNC5AQ6ZN44 842 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 Q8N9G6 341 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ZFAND1Q8TCF1 268 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 TRMT61BQ9BVS5 477 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ZNF471Q9BX82 626 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 BCO2Q9BYV7 579 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 TRPV4Q9HBA0 871 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ENAMQ9NRM1 1142 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 CCM2LQ9NUG4 571 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ZMYM5Q9UJ78 669 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 AP1M2Q9Y6Q5 423 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 SMCHD1A6NHR9 2005 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 COL4A6Q14031 1691 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 MEIOCA2RUB1 952 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 LINC01553A4QN01 128 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 C5orf51A6NDU8 294 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 FOXO6A8MYZ6 492 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 CASC3O15234 703 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 INSIG1O15503 277 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 LYRM1O43325 122 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ZMPSTE24O75844 475 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 CATP04040 527 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 SRPRAP08240 638 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 H2AFB2P0C5Z0 115 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 CST5P28325 142 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 CLCN4P51793 760 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 DGKEP52429 567 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 AIMP2Q13155 320 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 NUMA1Q14980 2115 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 GPRIN3Q6ZVF9 776 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 USP30Q70CQ3 517 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 SLC26A9Q7LBE3 791 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 LDB1Q86U70 411 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 TMEM41AQ96HV5 264 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ZNF607Q96SK3 696 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 FAIM2Q9BWQ8 316 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ARL6Q9H0F7 186 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 OSER1Q9NX31 292 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 SALL4Q9UJQ4 1053 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 PLAGL1Q9UM63 463 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 EXOSC1Q9Y3B2 195 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 U3KQV3 271 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 M0QZK8 103 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 LRRTM2O43300 516 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 DLX3O60479 287 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 GGCTO75223 188 aaKnown RBP5.76□□□□□ -1.49
CNOT1-211ENST00000567188 SLC43A1O75387 559 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 ZNF35P13682 527 aa5.76□□□□□ -1.49
CNOT1-211ENST00000567188 DNAJA1P31689 397 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms