RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 CDK2AP1O14519 115 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 ZG16O60844 167 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 LDB3O75112 727 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 SLC25A12O75746 678 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 EEF1DP29692 281 aaKnown RBP13.65□□□□□ -0.22
FANCA-220ENST00000566409 PIK3CBP42338 1070 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 CYB561P49447 251 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 HLCSP50747 726 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 DDX39BQ13838 428 aaKnown RBP13.65□□□□□ -0.22
FANCA-220ENST00000566409 GTF2H2Q13888 395 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 LIPJQ5W064 366 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 GTF2H2CQ6P1K8 395 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 CEP128Q6ZU80 1094 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 CHSY3Q70JA7 882 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 GOLGA7Q7Z5G4 137 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 SIAH3Q8IW03 269 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 ZNF321PQ8N8H1 164 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 SRFBP1Q8NEF9 429 aaKnown RBP13.65□□□□□ -0.22
FANCA-220ENST00000566409 DCAKDQ8WVC6 231 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 ANKRD9Q96BM1 317 aaPredicted RBP13.65□□□□□ -0.22
FANCA-220ENST00000566409 CMTM7Q96FZ5 175 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 VMP1Q96GC9 406 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 ZNF717Q9BY31 904 aaPredicted RBP13.65□□□□□ -0.22
FANCA-220ENST00000566409 ALOXE3Q9BYJ1 711 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 TSPYL1Q9H0U9 437 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 TSPAN10Q9H1Z9 355 aaPredicted RBP13.65□□□□□ -0.22
FANCA-220ENST00000566409 LIN28AQ9H9Z2 209 aaKnown RBP13.65□□□□□ -0.22
FANCA-220ENST00000566409 ADAP2Q9NPF8 381 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 DMRT3Q9NQL9 472 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 CPSF2Q9P2I0 782 aaKnown RBP13.65□□□□□ -0.22
FANCA-220ENST00000566409 RNF11Q9Y3C5 154 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 TSC22D4Q9Y3Q8 395 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 ZNF407Q9C0G0 2248 aa13.65□□□□□ -0.22
FANCA-220ENST00000566409 H0YIV9 168 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 PLPP1O14494 284 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 OR7A17O14581 309 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 NME2P1O60361 137 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 ITGA10O75578 1167 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 ETHE1O95571 254 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 INHBAP08476 426 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 NME2P22392 152 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 GCAP28676 217 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 SERPINB1P30740 379 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 RPS13P62277 151 aaKnown RBP13.64□□□□□ -0.23
FANCA-220ENST00000566409 ID2Q02363 134 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 ZRSR2Q15696 482 aaKnown RBP13.64□□□□□ -0.23
FANCA-220ENST00000566409 ELAVL1Q15717 326 aaKnown RBP13.64□□□□□ -0.23
FANCA-220ENST00000566409 MAPKAPK3Q16644 382 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 AP5B1Q2VPB7 878 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 OR4C11Q6IEV9 310 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 KLC3Q6P597 504 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 MYLK4Q86YV6 388 aaPredicted RBP13.64□□□□□ -0.23
FANCA-220ENST00000566409 TMEM151AQ8N4L1 468 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 CPSF7Q8N684 471 aaKnown RBP13.64□□□□□ -0.23
FANCA-220ENST00000566409 HORMAD2Q8N7B1 307 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 PTGR2Q8N8N7 351 aaPredicted RBP13.64□□□□□ -0.23
FANCA-220ENST00000566409 L3MBTL4Q8NA19 623 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 TMEM178AQ8NBL3 297 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 ROGDIQ9GZN7 287 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 IPPKQ9H8X2 491 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 ACTR8Q9H981 624 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 FBXW2Q9UKT8 454 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 ANGPTL3Q9Y5C1 460 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 APCP25054 2843 aa13.64□□□□□ -0.23
FANCA-220ENST00000566409 NCOA6Q14686 2063 aaPredicted RBP13.63□□□□□ -0.23
FANCA-220ENST00000566409 CSMD1Q96PZ7 3565 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 DNAJC13O75165 2243 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 A0A1B0GUH1 482 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 WASHC1A8K0Z3 465 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 POC1B-GALNT4F8VUJ3 575 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 ZNHIT1O43257 154 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 IFNA16P05015 189 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 SBK3P0C264 359 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 SSR2P43308 183 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 PIK3CGP48736 1102 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 NEK2P51955 445 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 STX4Q12846 297 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 SLAMF1Q13291 335 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 RCN2Q14257 317 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 CPSF6Q16630 551 aaKnown RBP eCLIP13.63□□□□□ -0.23
FANCA-220ENST00000566409 C18orf63Q68DL7 685 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 ZNF787Q6DD87 383 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 MDGA2Q7Z553 956 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 CHERPQ8IWX8 916 aaKnown RBP13.63□□□□□ -0.23
FANCA-220ENST00000566409 OR4N5Q8IXE1 308 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 TMEM132CQ8N3T6 1108 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 OR52B6Q8NGF0 335 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 WDR20Q8TBZ3 569 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 SREK1Q8WXA9 508 aaKnown RBP13.63□□□□□ -0.23
FANCA-220ENST00000566409 RGMAQ96B86 450 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 PHF21BQ96EK2 531 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 GPR137Q96N19 417 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 NSUN5Q96P11 429 aaKnown RBP13.63□□□□□ -0.23
FANCA-220ENST00000566409 CDK15Q96Q40 435 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 ZBTB26Q9HCK0 441 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 ADGRE2Q9UHX3 823 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 ZNF180Q9UJW8 692 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 NFU1Q9UMS0 254 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 ATG4BQ9Y4P1 393 aa13.63□□□□□ -0.23
FANCA-220ENST00000566409 PCDHGA11Q9Y5H2 935 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms