RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 TNFRSF17Q02223 184 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 SRSF11Q05519 484 aaKnown RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 KLC1Q07866 573 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 BIKQ13323 160 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 CAMK2BQ13554 666 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 PTGR1Q14914 329 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 SYT16Q17RD7 645 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 MINDY4Q4G0A6 757 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 CPTPQ5TA50 214 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 NDUFAF5Q5TEU4 345 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 MFSD4BQ5TF39 518 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 ZNF385CQ66K41 422 aaPredicted RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 C18orf63Q68DL7 685 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 FAM71E1Q6IPT2 247 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 OVCH1Q7RTY7 1134 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 MTDHQ86UE4 582 aaKnown RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 ZNF595Q8IYB9 648 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 SAMD14Q8IZD0 417 aaPredicted RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 DTWD1Q8N5C7 304 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 CPSF7Q8N684 471 aaKnown RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 NATD1Q8N6N6 113 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 IL22RA1Q8N6P7 574 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 FAM47BQ8NA70 645 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 GLB1L3Q8NCI6 653 aaPredicted RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 CLHC1Q8NHS4 586 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 GFM2Q969S9 779 aaKnown RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 FKBP10Q96AY3 582 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 MIEF2Q96C03 454 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 PPCDCQ96CD2 204 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 MTERF3Q96E29 417 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 EGLN2Q96KS0 407 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 MARK4Q96L34 752 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 LRRC37BQ96QE4 947 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 SCNM1Q9BWG6 230 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 BRINP2Q9C0B6 783 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 CHST8Q9H2A9 424 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 REEP4Q9H6H4 257 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 RPF2Q9H7B2 306 aaKnown RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 PRDM9Q9NQV7 894 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 PRTFDC1Q9NRG1 225 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 ATAD3AQ9NVI7 634 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 C14orf105Q9NVL8 296 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 WDR70Q9NW82 654 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 TMEM45AQ9NWC5 275 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 EHD3Q9NZN3 535 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 KCMF1Q9P0J7 381 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 FOXJ2Q9P0K8 574 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 SH3BP4Q9P0V3 963 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 NXT1Q9UKK6 140 aaKnown RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 KLK13Q9UKR3 277 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 PADI2Q9Y2J8 665 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 ATG4BQ9Y4P1 393 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 NEUROG3Q9Y4Z2 214 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 PCDHA9Q9Y5H5 950 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 GPR45Q9Y5Y3 372 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 COPG1Q9Y678 874 aaKnown RBP7.35□□□□□ -1.23
CDH1-208ENST00000565810 ZNF780BQ9Y6R6 833 aa7.35□□□□□ -1.23
CDH1-208ENST00000565810 PCM1Q15154 2024 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 TEX51A0A1B0GUA7 166 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 A0A1W2PR48 441 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 SYNDIG1LA6NDD5 238 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 CYR61O00622 381 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 FCHO1O14526 889 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 SCAMP2O15127 329 aaKnown RBP7.34□□□□□ -1.23
CDH1-208ENST00000565810 SLC22A2O15244 555 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 BRINP1O60477 761 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 CTNSO60931 367 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 DNAJB6O75190 326 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 BMP10O95393 424 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 AIFM1O95831 613 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 HEXBP07686 556 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 RAB40ALP0C0E4 278 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 ZGLP1P0C6A0 271 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 TCN2P20062 427 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 PIK3R1P27986 724 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 S100A3P33764 101 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 MRPL19P49406 292 aaKnown RBP7.34□□□□□ -1.23
CDH1-208ENST00000565810 HSD17B7P56937 341 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 KCNK10P57789 538 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 UFM1P61960 85 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 SNRPNP63162 240 aaKnown RBP7.34□□□□□ -1.23
CDH1-208ENST00000565810 STX4Q12846 297 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 SLC13A2Q13183 592 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 ERV3-1Q14264 604 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 NCF4Q15080 339 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 MAPRE2Q15555 327 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 DPY19L1Q2PZI1 675 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 AGKQ53H12 422 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 VWA2Q5GFL6 755 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 ANXA8L1Q5VT79 327 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 OR52E8Q6IFG1 317 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 PAOXQ6QHF9 649 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 MED25Q71SY5 747 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 COX15Q7KZN9 410 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 TICAM1Q8IUC6 712 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 VPS37AQ8NEZ2 397 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 OR4K14Q8NGD5 310 aa7.34□□□□□ -1.23
CDH1-208ENST00000565810 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDH1-208ENST00000565810 STT3BQ8TCJ2 826 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms