RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 Q8NBF4 154 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 NEK11Q8NG66 645 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 OR4A16Q8NH70 328 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 LIPHQ8WWY8 451 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 MOCOSQ96EN8 888 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 ZNF560Q96MR9 790 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 PRICKLE1Q96MT3 831 aaPredicted RBP3.72□□□□□ -1.81
CHD9-215ENST00000565442 AGAP3Q96P47 875 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 PRAM1Q96QH2 718 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 ATP6V0BQ99437 205 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 SSX3Q99909 188 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 TRIM7Q9C029 511 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 THAP9Q9H5L6 903 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 PLEKHA3Q9HB20 300 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 FETUBQ9UGM5 382 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 KNSTRNQ9Y448 316 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 TEX264Q9Y6I9 313 aa3.72□□□□□ -1.81
CHD9-215ENST00000565442 COL2A1P02458 1487 aaPredicted RBP3.72□□□□□ -1.81
CHD9-215ENST00000565442 ABCC9O60706 1549 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 IGHV3-38A0A0C4DH36 116 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 SYCE3A1L190 88 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 SHISA7A6NL88 538 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 H7C423 109 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 TLR4O00206 839 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 SLC28A1O00337 649 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 INPP4BO15327 924 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 TNFSF12O43508 249 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 ATP6V1G1O75348 118 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 TBX6O95947 436 aaPredicted RBP3.71□□□□□ -1.82
CHD9-215ENST00000565442 TRIM49P0CI25 452 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 TRIM49CP0CI26 452 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 RNF224P0DH78 156 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 THEGLP0DJG4 465 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 GPX3P22352 226 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 NT5C2P49902 561 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 LUMP51884 338 aaPredicted RBP3.71□□□□□ -1.82
CHD9-215ENST00000565442 ERVK-16P61578 105 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 NFATC2Q13469 925 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 KIAA0141Q14154 515 aaPredicted RBP3.71□□□□□ -1.82
CHD9-215ENST00000565442 RFTN2Q52LD8 501 aaPredicted RBP3.71□□□□□ -1.82
CHD9-215ENST00000565442 ETFRF1Q6IPR1 90 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 PLBD1Q6P4A8 553 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 ZNF613Q6PF04 617 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 TRIM65Q6PJ69 517 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 B3GLCTQ6Y288 498 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 SIDT2Q8NBJ9 832 aaKnown RBP3.71□□□□□ -1.82
CHD9-215ENST00000565442 C8orf46Q8TAG6 207 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 GTF3AQ92664 365 aaKnown RBP3.71□□□□□ -1.82
CHD9-215ENST00000565442 PCED1BQ96HM7 432 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 ZNF599Q96NL3 588 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 AGPAT1Q99943 283 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 FAM213AQ9BRX8 229 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 NUSAP1Q9BXS6 441 aaKnown RBP3.71□□□□□ -1.82
CHD9-215ENST00000565442 DCLRE1BQ9H816 532 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 MARCH7Q9H992 704 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 THAP10Q9P2Z0 257 aaPredicted RBP3.71□□□□□ -1.82
CHD9-215ENST00000565442 APPL1Q9UKG1 709 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 TDRKHQ9Y2W6 561 aaKnown RBP3.71□□□□□ -1.82
CHD9-215ENST00000565442 NOTCH2Q04721 2471 aa3.71□□□□□ -1.82
CHD9-215ENST00000565442 UMODL1Q5DID0 1318 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 SOCS3O14543 225 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 OGTO15294 1046 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 SORBS2O94875 1100 aaKnown RBP3.7□□□□□ -1.82
CHD9-215ENST00000565442 ABHD2P08910 425 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 ZNF883P0CG24 379 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 CD1DP15813 335 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 CYP3A5P20815 502 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 PKLRP30613 574 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 STIP1P31948 543 aaKnown RBP3.7□□□□□ -1.82
CHD9-215ENST00000565442 CCR4P51679 360 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 PEX3P56589 373 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 RBBP4Q09028 425 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 HEPACAMQ14CZ8 416 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 MLF2Q15773 248 aaPredicted RBP3.7□□□□□ -1.82
CHD9-215ENST00000565442 KNOP1Q1ED39 458 aaKnown RBP3.7□□□□□ -1.82
CHD9-215ENST00000565442 WSCD2Q2TBF2 565 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 TAF1BQ53T94 588 aaPredicted RBP3.7□□□□□ -1.82
CHD9-215ENST00000565442 NEPROQ6NW34 567 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 ZNF730Q6ZMV8 503 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 RABEPKQ7Z6M1 372 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 KCNMB4Q86W47 210 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 ZFAND4Q86XD8 727 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 KRTAP7-1Q8IUC3 87 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 WDR49Q8IV35 697 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 RTL3Q8N8U3 475 aaKnown RBP3.7□□□□□ -1.82
CHD9-215ENST00000565442 OR4L1Q8NH43 312 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 DTD2Q96FN9 168 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 LGMNQ99538 433 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 PINK1Q9BXM7 581 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 ABCG4Q9H172 646 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 PARLQ9H300 379 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 DPEP3Q9H4B8 488 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 PRMT8Q9NR22 394 aaPredicted RBP3.7□□□□□ -1.82
CHD9-215ENST00000565442 DDX28Q9NUL7 540 aaKnown RBP3.7□□□□□ -1.82
CHD9-215ENST00000565442 HMG20BQ9P0W2 317 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 TEKT2Q9UIF3 430 aa3.7□□□□□ -1.82
CHD9-215ENST00000565442 DHX29Q7Z478 1369 aaKnown RBP3.7□□□□□ -1.82
CHD9-215ENST00000565442 SH3PXD2BA1X283 911 aa3.69□□□□□ -1.82
CHD9-215ENST00000565442 CCDC69A6NI79 296 aa3.69□□□□□ -1.82
CHD9-215ENST00000565442 ZNF749O43361 778 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms