RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ROGDIQ9GZN7 287 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 OR51B5Q9H339 312 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 ACSS3Q9H6R3 686 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 LIN28AQ9H9Z2 209 aaKnown RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 VTI1BQ9UEU0 232 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF835Q9Y2P0 537 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 TEX15Q9BXT5 2789 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 SYCE1LA8MT33 242 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 PRSS44E7EML9 344 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 ASNA1O43681 348 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 KLK8O60259 260 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 KLHL2O95198 593 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 MLYCDO95822 493 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 GFAPP14136 432 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 EPB42P16452 691 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 GRNP28799 593 aaKnown RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 ECHS1P30084 290 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 SERPINB1P30740 379 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 PTGER1P34995 402 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 PHBP35232 272 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 RFC3P40938 356 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 SSR2P43308 183 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 MEOX1P50221 254 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 SERPINB8P50452 374 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 ALDH18A1P54886 795 aaKnown RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 GPR85P60893 370 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 ID2Q02363 134 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 RBPJQ06330 500 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 STX4Q12846 297 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 RCN2Q14257 317 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 WHAMMP3Q1A5X7 153 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 FAM83EQ2M2I3 478 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 TECRLQ5HYJ1 363 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 Q6ZPB1 254 aaPredicted RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 MDGA2Q7Z553 956 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 FGD2Q7Z6J4 655 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 MYLK4Q86YV6 388 aaPredicted RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 SPPL2CQ8IUH8 684 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 RELL1Q8IUW5 271 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 SULF2Q8IWU5 870 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 CYP4Z2PQ8N1L4 340 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 PLD6Q8N2A8 252 aaKnown RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 TMEM156Q8N614 296 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 SRFBP1Q8NEF9 429 aaKnown RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 ANKRD9Q96BM1 317 aaPredicted RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 CMTM7Q96FZ5 175 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 MTERF1Q99551 399 aaKnown RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 FUT8Q9BYC5 575 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 CDC42EP4Q9H3Q1 356 aaKnown RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 PRM3Q9NNZ6 103 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 DMRT3Q9NQL9 472 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 SUCOQ9UBS9 1254 aaKnown RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 DMGDHQ9UI17 866 aaKnown RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 ENTPD4Q9Y227 616 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 KLF13Q9Y2Y9 288 aaPredicted RBP9.33□□□□□ -0.92
CMTM3-209ENST00000565003 CLCA3PQ9Y6N3 262 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 PCNX1Q96RV3 2341 aa9.33□□□□□ -0.92
CMTM3-209ENST00000565003 ITPR2Q14571 2701 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ARHGAP10A1A4S6 786 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 CCDC189A1A4V9 331 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 SYNDIG1LA6NDD5 238 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 PLPP1O14494 284 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 PEX1O43933 1283 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 FGF17O60258 216 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 PRKRAO75569 313 aaKnown RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 OR2J2O76002 312 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ZFAND5O76080 213 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 SIX3O95343 332 aaPredicted RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ETHE1O95571 254 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ACSL3O95573 720 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 CPN2P22792 545 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 TYK2P29597 1187 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 PIK3CBP42338 1070 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 SSR4P51571 173 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 HK2P52789 917 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 HNRNPH2P55795 449 aaKnown RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ADORA2A-AS1P86434 159 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 SLAMF1Q13291 335 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ACAP2Q15057 778 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 PCBP2Q15366 365 aaKnown RBP eCLIP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 AP5B1Q2VPB7 878 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 DEPDC1Q5TB30 811 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 OR4C11Q6IEV9 310 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 KLC3Q6P597 504 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 NCCRP1Q6ZVX7 275 aaPredicted RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 CHSY3Q70JA7 882 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 GOLGA7Q7Z5G4 137 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 MRGPRGQ86SM5 289 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 OR4N5Q8IXE1 308 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 GHDCQ8N2G8 530 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 TMEM132CQ8N3T6 1108 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 MMGT1Q8N4V1 131 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ZNF808Q8N4W9 903 aaPredicted RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 MORN4Q8NDC4 146 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 PSD4Q8NDX1 1056 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 SLC2A12Q8TD20 617 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 SLC44A1Q8WWI5 657 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ZNF592Q92610 1267 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 DAZLQ92904 295 aaKnown RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ISL2Q96A47 359 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms