RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 REXO4Q9GZR2 422 aaKnown RBP17.25■□□□□ 0.35
CLN6-204ENST00000564752 VPS11Q9H270 941 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 COPS7BQ9H9Q2 264 aaPredicted RBP17.25■□□□□ 0.35
CLN6-204ENST00000564752 PPIEQ9UNP9 301 aaKnown RBP17.25■□□□□ 0.35
CLN6-204ENST00000564752 PDZD2O15018 2839 aa17.25■□□□□ 0.35
CLN6-204ENST00000564752 ADGRG4Q8IZF6 3080 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 ZNHIT1O43257 154 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 B3GALT2O43825 422 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 KLHL2O95198 593 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 SNRPB2P08579 225 aaKnown RBP17.24■□□□□ 0.35
CLN6-204ENST00000564752 ABOP16442 354 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 MSH2P43246 934 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 CLCN2P51788 898 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 HSF1Q00613 529 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 TGM3Q08188 693 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 ACAP2Q15057 778 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 ADPRMQ3LIE5 342 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 GDF7Q7Z4P5 450 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 FGD2Q7Z6J4 655 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 DOLPP1Q86YN1 238 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 SCUBE1Q8IWY4 988 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 POGLUT1Q8NBL1 392 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 B3GNT7Q8NFL0 401 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 AGAP11Q8TF27 550 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 UBE2E3Q969T4 207 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 PAFAH2Q99487 392 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 ZNF490Q9ULM2 529 aaPredicted RBP17.24■□□□□ 0.35
CLN6-204ENST00000564752 ANGPTL3Q9Y5C1 460 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 CLDN16Q9Y5I7 305 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 TACC2O95359 2948 aa17.24■□□□□ 0.35
CLN6-204ENST00000564752 MYO1DO94832 1006 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 CLDN14O95500 239 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 MTHFD2P13995 350 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 EPB42P16452 691 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 POU3F2P20265 443 aaPredicted RBP17.23■□□□□ 0.35
CLN6-204ENST00000564752 SERPINB9P50453 376 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 GPR143P51810 404 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 HSD17B7P56937 341 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 RAB38P57729 211 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 SETDB1Q15047 1291 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 PFKFB4Q16877 469 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 MED27Q6P2C8 311 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 SULF2Q8IWU5 870 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 TEX9Q8N6V9 391 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 MTFMTQ96DP5 389 aaKnown RBP17.23■□□□□ 0.35
CLN6-204ENST00000564752 QRFPRQ96P65 431 aa17.23■□□□□ 0.35
CLN6-204ENST00000564752 PNO1Q9NRX1 252 aaKnown RBP17.23■□□□□ 0.35
CLN6-204ENST00000564752 KLF13Q9Y2Y9 288 aaPredicted RBP17.23■□□□□ 0.35
CLN6-204ENST00000564752 A0A087WUV0 522 aaPredicted RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 TRBV11-1A0A0K0K1C0 115 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 E9PLN8 166 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 POC1B-GALNT4F8VUJ3 575 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 KLRC4-KLRK1H3BQV0 150 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 TGFBR3LH3BV60 316 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 C19orf84I3L1E1 186 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 CLDN4O14493 209 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 ADAM10O14672 748 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 TBX6O95947 436 aaPredicted RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 PCNAP12004 261 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 CERS1P27544 350 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 PTGER1P34995 402 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 CASP2P42575 452 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 MEOX1P50221 254 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 ALDH18A1P54886 795 aaKnown RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 MTTPP55157 894 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 E2F2Q14209 437 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 ABHD17CQ6PCB6 329 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 NCCRP1Q6ZVX7 275 aaPredicted RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 MYLK4Q86YV6 388 aaPredicted RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 ZNF295-AS1Q8N0V1 137 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 FAM47BQ8NA70 645 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 TMEM52Q8NDY8 209 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 UHMK1Q8TAS1 419 aaKnown RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 PHF10Q8WUB8 498 aaKnown RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 KCNC2Q96PR1 638 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 SERINC2Q96SA4 455 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 VKORC1Q9BQB6 163 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 TRIM8Q9BZR9 551 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 PRTFDC1Q9NRG1 225 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 CPSF2Q9P2I0 782 aaKnown RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 ZNF223Q9UK11 482 aaPredicted RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 FBXW2Q9UKT8 454 aa17.22■□□□□ 0.35
CLN6-204ENST00000564752 MRPS33Q9Y291 106 aaKnown RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 NCOA6Q14686 2063 aaPredicted RBP17.22■□□□□ 0.35
CLN6-204ENST00000564752 PRRG2O14669 202 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 PEX1O43933 1283 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 ITGA10O75578 1167 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 KRT38O76015 456 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 PPP2R1BP30154 601 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 SERPINB1P30740 379 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 HNRNPFP52597 415 aaKnown RBP17.21■□□□□ 0.35
CLN6-204ENST00000564752 RCN2Q14257 317 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 TECRLQ5HYJ1 363 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 GRHL2Q6ISB3 625 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 IFT20Q8IY31 132 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 ZNF595Q8IYB9 648 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 LAS2Q8IYD9 372 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 TMEM156Q8N614 296 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 SRFBP1Q8NEF9 429 aaKnown RBP17.21■□□□□ 0.35
CLN6-204ENST00000564752 C16orf52Q8NHV5 167 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms