RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PRAMEF2O60811 474 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 CBX6O95503 412 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 OTCP00480 354 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 GSTA1P08263 222 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 RPS17P08708 135 aaKnown RBP17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 SBK3P0C264 359 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 PYGBP11216 843 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 TLX1P31314 330 aaPredicted RBP17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 CLCN2P51788 898 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 CUL3Q13618 768 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 SERTAD2Q14140 314 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 TERF2Q15554 542 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 INAQ16352 499 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 EIF2S3LQ2VIR3 472 aaKnown RBP17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 RPS27LQ71UM5 84 aaKnown RBP17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 LGI4Q8N135 537 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 TMEM132CQ8N3T6 1108 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 BCORP1Q8N888 145 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 C7orf57Q8NEG2 295 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 B3GNT7Q8NFL0 401 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 PRR7Q8TB68 274 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 FAR1Q8WVX9 515 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 SERPINI1Q99574 410 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 NPAS2Q99743 824 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 PPCSQ9HAB8 311 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 DCDC2Q9UHG0 476 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 PHF11Q9UIL8 331 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 CLCA3PQ9Y6N3 262 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 TEX15Q9BXT5 2789 aa17.15■□□□□ 0.34
SYNGR3-204ENST00000564642 ANKUB1A6NFN9 424 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 GABRR3A8MPY1 467 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 TGFBR3LH3BV60 316 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 MAN1A2O60476 641 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 LDB3O75112 727 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 RASAL1O95294 804 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 SHBGP04278 402 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 TNNI3P19429 210 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 PPP2R1BP30154 601 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 CD96P40200 585 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 CDH13P55290 713 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 HERVK_113P63132 956 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 OC90Q02509 493 aaPredicted RBP17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 IFT88Q13099 833 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 TRAF3Q13114 568 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 TUBA3CQ13748 450 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 ELAVL1Q15717 326 aaKnown RBP17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 FRG2Q64ET8 278 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 TUBA3EQ6PEY2 450 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 CYP20A1Q6UW02 462 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 GPR180Q86V85 440 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 ZCCHC7Q8N3Z6 543 aaKnown RBP17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 HORMAD2Q8N7B1 307 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 OR4F6Q8NGB9 312 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 ZNF483Q8TF39 744 aaPredicted RBP17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 VMP1Q96GC9 406 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 FRG2BQ96QU4 278 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 C1QTNF3Q9BXJ4 246 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 ERVK-6Q9BXR3 956 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 ANKZF1Q9H8Y5 726 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 ANKRD10Q9NXR5 420 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 VTI1BQ9UEU0 232 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 CLDN16Q9Y5I7 305 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 ESPL1Q14674 2120 aa17.14■□□□□ 0.33
SYNGR3-204ENST00000564642 NBASA2RRP1 2371 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 TRBV11-1A0A0K0K1C0 115 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 MYOCOSA0A1B0GUC4 107 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 A0A1W2PPM1 405 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 CDK2AP1O14519 115 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 FCHO1O14526 889 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 SUPT7LO94864 414 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 KRT15P19012 456 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 TSPAN8P19075 237 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 ATP5F1P24539 256 aaPredicted RBP17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 BUD31P41223 144 aaPredicted RBP17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 SLCO1A2P46721 670 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 ST13P50502 369 aaKnown RBP17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 CLCQ05315 142 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 GGTA1PQ4G0N0 100 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 ZNF766Q5HY98 468 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 C10orf62Q5T681 223 aaPredicted RBP17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 SLC22A9Q8IVM8 553 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 APCDD1LQ8NCL9 501 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 MZB1Q8WU39 189 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 DAZLQ92904 295 aaKnown RBP17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 NCLNQ969V3 563 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 SIGLEC12Q96PQ1 595 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 ELOVL6Q9H5J4 265 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 RPF2Q9H7B2 306 aaKnown RBP17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 OLAHQ9NV23 265 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 PPT2Q9UMR5 302 aa17.13■□□□□ 0.33
SYNGR3-204ENST00000564642 CLEC18AA5D8T8 446 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 SMIM23A6NLE4 172 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 DLX3O60479 287 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 AGFG2O95081 481 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 ETHE1O95571 254 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 CD46P15529 392 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 IMPDH1P20839 514 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 TPP2P29144 1249 aaPredicted RBP17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 HSD17B3P37058 310 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 MLF1P58340 268 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms