RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 PEX11AO75192 247 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 SEC22BO75396 215 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 PRKRAO75569 313 aaKnown RBP11.74□□□□□ -0.53
KARS-204ENST00000564578 FHP07954 510 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 FURINP09958 794 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 PRR35P0CG20 571 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 IL10P22301 178 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 RAB38P57729 211 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 BTG2P78543 158 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 IL10RAQ13651 578 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 C6orf136Q5SQH8 315 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 NOXRED1Q6NXP6 359 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 FAM47BQ8NA70 645 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 STARD8Q92502 1023 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 TM4SF18Q96CE8 201 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 FCRL1Q96LA6 429 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 EBPLQ9BY08 206 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 AKTIPQ9H8T0 292 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 C14orf105Q9NVL8 296 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 MCM8Q9UJA3 840 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 NXT1Q9UKK6 140 aaKnown RBP11.74□□□□□ -0.53
KARS-204ENST00000564578 MKL2Q9ULH7 1088 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 DLGAP4Q9Y2H0 992 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 SLCO1B7G3V0H7 640 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 SDHDO14521 159 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 PCDH7O60245 1069 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 B4GALT2O60909 372 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 CREG1O75629 220 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 CD63P08962 238 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 TACR1P25103 407 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 TIA1P31483 386 aaKnown RBP eCLIP11.74□□□□□ -0.53
KARS-204ENST00000564578 MAPK12P53778 367 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 RHAGQ02094 409 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 GALNTL6Q49A17 601 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 CYP20A1Q6UW02 462 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 LARP4Q71RC2 724 aaKnown RBP eCLIP11.74□□□□□ -0.534e-12■■■■■ 38.4
KARS-204ENST00000564578 MMP21Q8N119 569 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 ADAMTS17Q8TE56 1095 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 TUBGCP3Q96CW5 907 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 MAELQ96JY0 434 aaKnown RBP11.74□□□□□ -0.53
KARS-204ENST00000564578 CNTNAP3BQ96NU0 1288 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 CNTNAP3Q9BZ76 1288 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 WDR55Q9H6Y2 383 aaPredicted RBP11.74□□□□□ -0.53
KARS-204ENST00000564578 VTI1BQ9UEU0 232 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 C3orf18Q9UK00 162 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 PADI2Q9Y2J8 665 aa11.74□□□□□ -0.53
KARS-204ENST00000564578 POLR3HQ9Y535 204 aaPredicted RBP11.74□□□□□ -0.53
KARS-204ENST00000564578 CACNA1GO43497 2377 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 TGFBR3LH3BV60 316 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 NKX2-8O15522 239 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 ANXA4P09525 319 aaPredicted RBP11.73□□□□□ -0.53
KARS-204ENST00000564578 ALOX15P16050 662 aaPredicted RBP11.73□□□□□ -0.53
KARS-204ENST00000564578 EPHA3P29320 983 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 MINDY4Q4G0A6 757 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 SLC9B1Q4ZJI4 515 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 ATP1A1-AS1Q5TC04 95 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 NDUFAF5Q5TEU4 345 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 CLNKQ7Z7G1 428 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 EGLN2Q96KS0 407 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 PPP3R2Q96LZ3 170 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 ZNF317Q96PQ6 595 aaPredicted RBP11.73□□□□□ -0.53
KARS-204ENST00000564578 CRB3Q9BUF7 120 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 EFHD1Q9BUP0 239 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 MS4A12Q9NXJ0 267 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 ZMIZ1Q9ULJ6 1067 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 USH1CQ9Y6N9 552 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 ITPR1Q14643 2758 aa11.73□□□□□ -0.53
KARS-204ENST00000564578 PCSK5Q92824 1860 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 IGKV3D-11A0A0A0MRZ8 115 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 GNG14A0A1W2PPG7 69 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 ARHGAP10A1A4S6 786 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 GLOD5A6NK44 160 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 PSMD12O00232 456 aaPredicted RBP11.72□□□□□ -0.53
KARS-204ENST00000564578 PGRMC2O15173 223 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 AIFM1O95831 613 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 SDC1P18827 310 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 MAOAP21397 527 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 CPN2P22792 545 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 MMP11P24347 488 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 FOLR3P41439 243 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 EMP2P54851 167 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 TAS2R50P59544 299 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 RPL38P63173 70 aaKnown RBP11.72□□□□□ -0.53
KARS-204ENST00000564578 TNFRSF17Q02223 184 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 SSPNQ14714 243 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 TUBB8Q3ZCM7 444 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 ATP6AP1LQ52LC2 224 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 EPGNQ6UW88 154 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 SCUBE1Q8IWY4 988 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 EFCAB3Q8N7B9 438 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 PFDN4Q9NQP4 134 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 NECTIN3Q9NQS3 549 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 RIC8BQ9NVN3 520 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 LYARQ9NX58 379 aaKnown RBP11.72□□□□□ -0.53
KARS-204ENST00000564578 BAIAP2L1Q9UHR4 511 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 PHF11Q9UIL8 331 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 EXO1Q9UQ84 846 aaKnown RBP11.72□□□□□ -0.53
KARS-204ENST00000564578 TMED5Q9Y3A6 229 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 HS3ST3B1Q9Y662 390 aa11.72□□□□□ -0.53
KARS-204ENST00000564578 GOLGA8QA0A0J9YX86 632 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms