RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 VMP1Q96GC9 406 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 ADGRE2Q9UHX3 823 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 ZNF180Q9UJW8 692 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 FBXW2Q9UKT8 454 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 PPIEQ9UNP9 301 aaKnown RBP18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 RNF11Q9Y3C5 154 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 TNPO3Q9Y5L0 923 aaKnown RBP18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 MAST4O15021 2626 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 EXOC1LA0A1B0GW35 172 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 PLPP1O14494 284 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 PRKNO60260 465 aaPredicted RBP18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 LDB3O75112 727 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 SLC25A12O75746 678 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 UNC5CO95185 931 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 SP1P08047 785 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 RBP1P09455 135 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 RHOXF2BP0C7M4 288 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 CNTFP26441 200 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 PIK3CBP42338 1070 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 PIK3CGP48736 1102 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 GPR143P51810 404 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 RPS13P62277 151 aaKnown RBP18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 ELAVL1Q15717 326 aaKnown RBP18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 C1QL3Q5VWW1 255 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 OR4C11Q6IEV9 310 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 GALNTL5Q7Z4T8 443 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 ZNF227Q86WZ6 799 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 ARMC10Q8N2F6 343 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 HORMAD2Q8N7B1 307 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 TMEM178AQ8NBL3 297 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 SREK1Q8WXA9 508 aaKnown RBP18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 NSUN5Q96P11 429 aaKnown RBP18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 CDK15Q96Q40 435 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 RHOXF2Q9BQY4 288 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 ALOXE3Q9BYJ1 711 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 NOL11Q9H8H0 719 aaKnown RBP18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 SEC14L3Q9UDX4 400 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 TSC22D4Q9Y3Q8 395 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 PCDHGA11Q9Y5H2 935 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 CROCCQ5TZA2 2017 aa18.62■□□□□ 0.57
SHCBP1-203ENST00000564272 H0YIV9 168 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 FCHO1O14526 889 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 OR7A17O14581 309 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 UGDHO60701 494 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 CLDN1O95832 211 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 STSP08842 583 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 ABHD2P08910 425 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 CPN2P22792 545 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 GCAP28676 217 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 TRHRP34981 398 aaPredicted RBP18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 ARL1P40616 181 aaPredicted RBP18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 CYB561P49447 251 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 STX4Q12846 297 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 SLAMF1Q13291 335 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 TSNAXIP1Q2TAA8 658 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 SLC25A25Q6KCM7 469 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 METTL2BQ6P1Q9 378 aaKnown RBP18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 IFT20Q8IY31 132 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 L3MBTL4Q8NA19 623 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 LRRN4CLQ8ND94 238 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 OR52B6Q8NGF0 335 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 RGMAQ96B86 450 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 REPS1Q96D71 796 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 FRMD6Q96NE9 622 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 TSPAN10Q9H1Z9 355 aaPredicted RBP18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 PCTPQ9UKL6 214 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 SPACA6W5XKT8 324 aa18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 DIDO1Q9BTC0 2240 aaKnown RBP18.61■□□□□ 0.57
SHCBP1-203ENST00000564272 ASPDHA6ND91 283 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 STX16-NPEPL1H3BU86 382 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 STX16O14662 325 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 FGF17O60258 216 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 NME2P1O60361 137 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 SMIM24O75264 130 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 PRKRAO75569 313 aaKnown RBP18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 ETHE1O95571 254 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 FAM153BP0C7A2 387 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 COL6A2P12110 1019 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 NME2P22392 152 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 HLCSP50747 726 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 NEK2P51955 445 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 PHEXP78562 749 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 ZRSR2Q15696 482 aaKnown RBP18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 MAPKAPK3Q16644 382 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 FAM153CQ494X1 144 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 C16orf47Q6ZP98 133 aaPredicted RBP18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 FJX1Q86VR8 437 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 TMEM132CQ8N3T6 1108 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 ZNF321PQ8N8H1 164 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 WDR20Q8TBZ3 569 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 PTPMT1Q8WUK0 201 aaPredicted RBP18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 ANKRD9Q96BM1 317 aaPredicted RBP18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 TRIM44Q96DX7 344 aaPredicted RBP18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 CCDC77Q9BR77 488 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 CENPKQ9BS16 269 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 ZNF717Q9BY31 904 aaPredicted RBP18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 TRIM45Q9H8W5 580 aaPredicted RBP18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 LIN28AQ9H9Z2 209 aaKnown RBP18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 VTI1BQ9UEU0 232 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms