RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FASTKD1Q53R41 847 aaKnown RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 FGD3Q5JSP0 725 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 ADAMTSL4-AS1Q5T5F5 129 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 C12orf60Q5U649 245 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 LIPKQ5VXJ0 399 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 SLC25A47Q6Q0C1 308 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 FCRLAQ7L513 359 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 MCM10Q7L590 875 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 ERASQ7Z444 233 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 PTAR1Q7Z6K3 402 aaPredicted RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 ADCK1Q86TW2 530 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 LACC1Q8IV20 430 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 WDR49Q8IV35 697 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 GPC2Q8N158 579 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 SLC43A2Q8N370 569 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 DCLK2Q8N568 766 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 NIPA2Q8N8Q9 360 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 RNF149Q8NC42 400 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 ADAD2Q8NCV1 583 aaKnown RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 IPMKQ8NFU5 416 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 OR10G8Q8NGN5 311 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 OR4L1Q8NH43 312 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 OR1L3Q8NH93 324 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 MRGPRDQ8TDS7 321 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 APOBEC4Q8WW27 367 aaKnown RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 SYAP1Q96A49 352 aaPredicted RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 TMEM186Q96B77 213 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 C2orf48Q96LS8 159 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 TSGA13Q96PP4 275 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 LPAR4Q99677 370 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 COQ7Q99807 217 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 FUCA2Q9BTY2 467 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 WDR13Q9H1Z4 485 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 TMEM245Q9H330 911 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 TMEM231Q9H6L2 316 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 FGF22Q9HCT0 170 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 SCRT2Q9NQ03 307 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 YAE1D1Q9NRH1 226 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 MAN2C1Q9NTJ4 1040 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 DDX28Q9NUL7 540 aaKnown RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 PLEK2Q9NYT0 353 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 IL36AQ9UHA7 158 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 IL20RAQ9UHF4 553 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 MRTO4Q9UKD2 239 aaKnown RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 ANGPTL3Q9Y5C1 460 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 FAM205AQ6ZU69 1335 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 A0A087WZ39 114 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 SH3PXD2BA1X283 911 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 KPNA7A9QM74 516 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 SIGLEC5O15389 551 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 LRP3O75074 770 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 CLN5O75503 358 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 SEC24AO95486 1093 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 CPNE6O95741 557 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 EPOP01588 193 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 GSTA2P09210 222 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 TSPY4P0CV99 314 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 TSPY10P0CW01 314 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 SLC2A2P11168 524 aaPredicted RBP2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 CYP11B1P15538 503 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ACP1P24666 158 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ACKR3P25106 362 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 HLA-FP30511 346 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 STIP1P31948 543 aaKnown RBP2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ID1P41134 155 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 TRPC1P48995 793 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 VEGFCP49767 419 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 XGP55808 180 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 OR1D5P58170 312 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 IRX4P78413 519 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 CNTN1Q12860 1018 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 TSTA3Q13630 321 aaPredicted RBP2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 TRADDQ15628 312 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 DCAF12Q5T6F0 453 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ZNF776Q68DI1 518 aaPredicted RBP2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 SNRNP48Q6IEG0 339 aaKnown RBP2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 PWWP2BQ6NUJ5 590 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 NEK5Q6P3R8 708 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 Q6ZSR9 355 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 C15orf52Q6ZUT6 534 aaKnown RBP2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 LMNTD2Q8IXW0 634 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ARL6IP6Q8N6S5 226 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ATP8B4Q8TF62 1192 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 SMAP2Q8WU79 429 aaPredicted RBP2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 GATAD1Q8WUU5 269 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ZNRF4Q8WWF5 429 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 GLYATL1Q969I3 302 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 SLCO4A1Q96BD0 722 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 MRPL38Q96DV4 380 aaKnown RBP2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 PCED1BQ96HM7 432 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 GUCD1Q96NT3 240 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ERGIC2Q96RQ1 377 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 KCNK16Q96T55 309 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 AGPAT1Q99943 283 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 JPH2Q9BR39 696 aaPredicted RBP2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 CARD6Q9BX69 1037 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 COQ10BQ9H8M1 238 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ACTR8Q9H981 624 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ROPN1Q9HAT0 212 aaPredicted RBP2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 EXOC1Q9NV70 894 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms