RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 CPN2P22792 545 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 CNTFP26441 200 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 PIK3CBP42338 1070 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 CASP6P55212 293 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 GTF2H2Q13888 395 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 SERTAD2Q14140 314 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 PCBP2Q15366 365 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLK3-210ENST00000563112 KRTCAP3Q53RY4 240 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 DEPDC1Q5TB30 811 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 C1QL3Q5VWW1 255 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 HIST2H2BCQ6DN03 193 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 GTF2H2CQ6P1K8 395 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 METTL2BQ6P1Q9 378 aaKnown RBP15.72■□□□□ 0.11
CLK3-210ENST00000563112 UBE3DQ7Z6J8 389 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 ARMC10Q8N2F6 343 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 TMEM156Q8N614 296 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 APCDD1LQ8NCL9 501 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 KIF18AQ8NI77 898 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 THAP3Q8WTV1 239 aaPredicted RBP15.72■□□□□ 0.11
CLK3-210ENST00000563112 NCLNQ969V3 563 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 RELTQ969Z4 430 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 RGMAQ96B86 450 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 SCYL1Q96KG9 808 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 GPR78Q96P69 363 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 PAFAH2Q99487 392 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 MAPKAP1Q9BPZ7 522 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 TRIM45Q9H8W5 580 aaPredicted RBP15.72■□□□□ 0.11
CLK3-210ENST00000563112 IPPKQ9H8X2 491 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 KCMF1Q9P0J7 381 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 SUCOQ9UBS9 1254 aaKnown RBP15.72■□□□□ 0.11
CLK3-210ENST00000563112 TMCO1Q9UM00 188 aa15.72■□□□□ 0.11
CLK3-210ENST00000563112 A0A087WUV0 522 aaPredicted RBP15.71■□□□□ 0.11
CLK3-210ENST00000563112 ASPDHA6ND91 283 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 POC1B-GALNT4F8VUJ3 575 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 TGFBR3LH3BV60 316 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 RTCAO00442 366 aaKnown RBP15.71■□□□□ 0.11
CLK3-210ENST00000563112 UGDHO60701 494 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 SCELO95171 688 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 CLDN1O95832 211 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 PPP2R1BP30154 601 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 SRSF11Q05519 484 aaKnown RBP15.71■□□□□ 0.11
CLK3-210ENST00000563112 TSNAXIP1Q2TAA8 658 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 ZNF468Q5VIY5 522 aaPredicted RBP15.71■□□□□ 0.11
CLK3-210ENST00000563112 OR4C11Q6IEV9 310 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 ZNF793Q6ZN11 406 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.71■□□□□ 0.11
CLK3-210ENST00000563112 MORN4Q8NDC4 146 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 OR14A16Q8NHC5 309 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 HUS1BQ8NHY5 278 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 ATP6V1E2Q96A05 226 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 OR51B5Q9H339 312 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 MS4A12Q9NXJ0 267 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 VTI1BQ9UEU0 232 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 TSC22D4Q9Y3Q8 395 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 CLDN16Q9Y5I7 305 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 MYO7BQ6PIF6 2116 aa15.71■□□□□ 0.11
CLK3-210ENST00000563112 SAP18O00422 153 aaKnown RBP15.7■□□□□ 0.1
CLK3-210ENST00000563112 NME2P1O60361 137 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 SMIM24O75264 130 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 COL6A2P12110 1019 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 NME2P22392 152 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 PTX3P26022 381 aaPredicted RBP15.7■□□□□ 0.1
CLK3-210ENST00000563112 TLX1P31314 330 aaPredicted RBP15.7■□□□□ 0.1
CLK3-210ENST00000563112 ARL1P40616 181 aaPredicted RBP15.7■□□□□ 0.1
CLK3-210ENST00000563112 SSR4P51571 173 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 GPR143P51810 404 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 ARFIP1P53367 373 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 SLAMF1Q13291 335 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 BIKQ13323 160 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 ZRSR2Q15696 482 aaKnown RBP15.7■□□□□ 0.1
CLK3-210ENST00000563112 TECRLQ5HYJ1 363 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 UBAP2Q5T6F2 1119 aaKnown RBP15.7■□□□□ 0.1
CLK3-210ENST00000563112 LGSNQ5TDP6 509 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 MTFR2Q6P444 385 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 GOLGA7Q7Z5G4 137 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 CEP112Q8N8E3 955 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 PTGR2Q8N8N7 351 aaPredicted RBP15.7■□□□□ 0.1
CLK3-210ENST00000563112 MTERF1Q99551 399 aaKnown RBP15.7■□□□□ 0.1
CLK3-210ENST00000563112 DMRT3Q9NQL9 472 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 ZNF180Q9UJW8 692 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 KLF13Q9Y2Y9 288 aaPredicted RBP15.7■□□□□ 0.1
CLK3-210ENST00000563112 YARS2Q9Y2Z4 477 aaKnown RBP15.7■□□□□ 0.1
CLK3-210ENST00000563112 TEX15Q9BXT5 2789 aa15.7■□□□□ 0.1
CLK3-210ENST00000563112 LRRC14BA6NHZ5 514 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 NPIPA5E9PKD4 350 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 H0YIV9 168 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 KLRC4-KLRK1H3BQV0 150 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 CCL21O00585 134 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 ZG16O60844 167 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 LDB3O75112 727 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 ITGA10O75578 1167 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 SIX3O95343 332 aaPredicted RBP15.69■□□□□ 0.1
CLK3-210ENST00000563112 CLDN9O95484 217 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 COX7A2P14406 83 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 RPS13P62277 151 aaKnown RBP15.69■□□□□ 0.1
CLK3-210ENST00000563112 CPSF6Q16630 551 aaKnown RBP eCLIP15.69■□□□□ 0.1
CLK3-210ENST00000563112 HSDL2Q6YN16 418 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 IFT20Q8IY31 132 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 CYP4Z2PQ8N1L4 340 aa15.69■□□□□ 0.1
CLK3-210ENST00000563112 PLD6Q8N2A8 252 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms