RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 IL2P60568 153 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 SKP1P63208 163 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 CDK16Q00536 496 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 FOXO1Q12778 655 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 MSS51Q4VC12 460 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 WLSQ5T9L3 541 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 DRICH1Q6PGQ1 229 aaPredicted RBP10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 C4orf22Q6V702 233 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 TMEM64Q6YI46 380 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 HSDL2Q6YN16 418 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 DGAT2L6Q6ZPD8 337 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 RTL4Q6ZR62 310 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 GK5Q6ZS86 529 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 CHSY3Q70JA7 882 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 KLHDC8AQ8IYD2 350 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 SPATA6LQ8N4H0 392 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 TBC1D19Q8N5T2 526 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 SLC2A12Q8TD20 617 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 PTPMT1Q8WUK0 201 aaPredicted RBP10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 NINJ1Q92982 152 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 ESAMQ96AP7 390 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 PPWD1Q96BP3 646 aaKnown RBP10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 EGFL8Q99944 293 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 AIF1LQ9BQI0 150 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 FAM167BQ9BTA0 163 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 IL1RL2Q9HB29 575 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 MED12LQ86YW9 2145 aa10.79□□□□□ -0.68
NSMCE1-202ENST00000561960 SAP18O00422 153 aaKnown RBP10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 AQP7O14520 342 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 CLGNO14967 610 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 SMAD7O15105 426 aaKnown RBP10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 B3GALT2O43825 422 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 PRKRAO75569 313 aaKnown RBP10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 PIAS1O75925 651 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 ATE1O95260 518 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 ETHE1O95571 254 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 TBX6O95947 436 aaPredicted RBP10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 IGHG3P01860 377 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 P04436 131 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 AHRP35869 848 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 LIM2P55344 173 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 KCNJ2P63252 427 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 RNF4P78317 190 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 KEAP1Q14145 624 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 SLC10A1Q14973 349 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 FLYWCH1Q4VC44 716 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 BICRALQ6AI39 1079 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 SBSNQ6UWP8 590 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 PAMR1Q6UXH9 720 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 CLEC9AQ6UXN8 241 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 KIAA0408Q6ZU52 694 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 VN1R5Q7Z5H4 357 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 PRIMA1Q86XR5 153 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 CIARTQ8N365 385 aaPredicted RBP10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 RNF175Q8N4F7 328 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 RNF10Q8N5U6 811 aaKnown RBP10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 FAM13CQ8NE31 585 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 TRPV3Q8NET8 790 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 CALML6Q8TD86 181 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 MAGOHBQ96A72 148 aaKnown RBP10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 MS4A6EQ96DS6 147 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 F2RL3Q96RI0 385 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 SH3GL2Q99962 352 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 SORBS1Q9BX66 1292 aaKnown RBP10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 ALOXE3Q9BYJ1 711 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 EPB41L4BQ9H329 900 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 PELI2Q9HAT8 420 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 ADAP2Q9NPF8 381 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 SACM1LQ9NTJ5 587 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 ATG4BQ9Y4P1 393 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 MMACHCQ9Y4U1 282 aa10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.78□□□□□ -0.68
NSMCE1-202ENST00000561960 ANK3Q12955 4377 aaKnown RBP10.77□□□□□ -0.68
NSMCE1-202ENST00000561960 ARID1AO14497 2285 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 C15orf38-AP3S2A0A0A6YYH1 394 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 FAM221AA4D161 298 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 URADA6NGE7 173 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 EEF1E1-BLOC1S5C9J1V9 151 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 EEF1E1O43324 174 aaKnown RBP10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 SERPINA6P08185 405 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 GMPRP36959 345 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 MAGEA6P43360 314 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 STX4Q12846 297 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 ELAVL1Q15717 326 aaKnown RBP10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 PPP1R3AQ16821 1122 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 DEFB113Q30KQ7 82 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 SLC25A35Q3KQZ1 300 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 NDUFAF5Q5TEU4 345 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 TRMT10BQ6PF06 316 aaKnown RBP10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 KRTAP1-3Q8IUG1 177 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 ULK2Q8IYT8 1036 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 GAL3ST3Q96A11 431 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 QRFPRQ96P65 431 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 ALPK1Q96QP1 1244 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 GAL3ST4Q96RP7 486 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 MAPKAP1Q9BPZ7 522 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 SARGQ9BW04 601 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 TRIM54Q9BYV2 358 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 FAM129AQ9BZQ8 928 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 ZNF395Q9H8N7 513 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms