RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PEX2P28328 305 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 CMPK1P30085 196 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 HOXA6P31267 233 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 HPCAL1P37235 193 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 FRKP42685 505 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 ARFIP1P53367 373 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 MVDP53602 400 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 EPHA4P54764 986 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SESN3P58005 492 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 TAS2R50P59544 299 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 CYP4F2P78329 520 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 PHEXP78562 749 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 RELAQ04206 551 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 CSTF1Q05048 431 aaKnown RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 KLC1Q07866 573 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 C2orf80Q0P641 193 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 GAB1Q13480 694 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 GPR18Q14330 331 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 KRT33BQ14525 404 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 KIR2DS3Q14952 304 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 KIR2DS5Q14953 304 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 ADRM1Q16186 407 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 TMEM35AQ53FP2 167 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SFT2D3Q587I9 215 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 CPTPQ5TA50 214 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 LPCAT4Q643R3 524 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 FCRL6Q6DN72 434 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 FBXO42Q6P3S6 717 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 IGF2-ASQ6U949 168 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SPATA24Q86W54 205 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 PARGQ86W56 976 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 PROSER1Q86XN7 944 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 PTOV1Q86YD1 416 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SPPL2CQ8IUH8 684 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 DEFB119Q8N690 84 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 FAM47BQ8NA70 645 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 TTLQ8NG68 377 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 OR10A6Q8NH74 314 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SLC37A2Q8TED4 501 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 ZFP90Q8TF47 636 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 CANT1Q8WVQ1 401 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 MS4A6EQ96DS6 147 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 TM4SF19Q96DZ7 209 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SMIM10Q96HG1 83 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 QRFPRQ96P65 431 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 TACO1Q9BSH4 297 aaKnown RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 EPS8L2Q9H6S3 715 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 RMND5AQ9H871 391 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 GORASP2Q9H8Y8 452 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 TM9SF3Q9HD45 589 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SLAMF7Q9NQ25 335 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 PRDM7Q9NQW5 492 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 RASSF1Q9NS23 344 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 POT1Q9NUX5 634 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 FAM86C1Q9NVL1 165 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 GPATCH2Q9NW75 528 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 APOBEC3BQ9UH17 382 aaKnown RBP6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SNX7Q9UNH6 387 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 INVSQ9Y283 1065 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 KLHL20Q9Y2M5 609 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 SPEF1Q9Y4P9 236 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 AP4S1Q9Y587 144 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 ADAMTS9Q9P2N4 1935 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 ZDBF2Q9HCK1 2354 aa6.21□□□□□ -1.42
CAPN3-210ENST00000561817 TNRC6BQ9UPQ9 1833 aaKnown RBP6.2□□□□□ -1.42
CAPN3-210ENST00000561817 CACNA1IQ9P0X4 2223 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 GNG14A0A1W2PPG7 69 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 DHRS12A0PJE2 317 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 ISM1B1AKI9 464 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 TLR4O00206 839 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 RFXANKO14593 260 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 KDM1AO60341 852 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 NOBOXO60393 691 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 CTSVO60911 334 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 KCNK5O95279 499 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 FKBP9O95302 570 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 GPIP06744 558 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 UMPSP11172 480 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 ACADSP16219 412 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF26P17031 533 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-210ENST00000561817 ENGP17813 658 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 IL1RNP18510 177 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 DDCP20711 480 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 EFNA1P20827 205 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-210ENST00000561817 ATP6V1C1P21283 382 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 MAOBP27338 520 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 CD38P28907 300 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 GATA4P43694 442 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 GSTM5P46439 218 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 CXCL12P48061 93 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 FNTBP49356 437 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 POLE2P56282 527 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 NXPH1P58417 271 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 TRA2BP62995 288 aaKnown RBP6.2□□□□□ -1.42
CAPN3-210ENST00000561817 ABHD18Q0P651 414 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 LRRC74AQ0VAA2 488 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 C1orf61Q13536 156 aa6.2□□□□□ -1.42
CAPN3-210ENST00000561817 ANGPT1Q15389 498 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms