RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 POLQO75417 2590 aa10.81□□□□□ -0.68
USP3-220ENST00000561381 EML6Q6ZMW3 1958 aa10.81□□□□□ -0.68
USP3-220ENST00000561381 A0A088AWK7 358 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 FAM166BA8MTA8 275 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 A8MVJ9 347 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 CCDC188H7C350 402 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 RTCAO00442 366 aaKnown RBP10.8□□□□□ -0.68
USP3-220ENST00000561381 CLGNO14967 610 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 ZNF354AO60765 605 aaPredicted RBP10.8□□□□□ -0.68
USP3-220ENST00000561381 CTNSO60931 367 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 LDB3O75112 727 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 SH3BGRLO75368 114 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 STK16O75716 305 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 TUBB4AP04350 444 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 ZNF10P21506 573 aaPredicted RBP10.8□□□□□ -0.68
USP3-220ENST00000561381 GSTM2P28161 218 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 SSTR2P30874 369 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 SOX3P41225 446 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 KCNC1P48547 511 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 ID2Q02363 134 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 ELAVL1Q15717 326 aaKnown RBP10.8□□□□□ -0.68
USP3-220ENST00000561381 PDK4Q16654 411 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 SULT1C3Q6IMI6 304 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 TCAIMQ8N3R3 496 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 OR2M7Q8NG81 312 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 PYROXD1Q8WU10 500 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 ASB15Q8WXK1 588 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 WDR34Q96EX3 536 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 PTCD3Q96EY7 689 aaKnown RBP10.8□□□□□ -0.68
USP3-220ENST00000561381 SEC16BQ96JE7 1060 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 RASL10BQ96S79 203 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 NAPGQ99747 312 aaPredicted RBP10.8□□□□□ -0.68
USP3-220ENST00000561381 SPOCK3Q9BQ16 436 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 CAPS2Q9BXY5 557 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 ALOXE3Q9BYJ1 711 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 OR8D2Q9GZM6 311 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 PITHD1Q9GZP4 211 aaPredicted RBP10.8□□□□□ -0.68
USP3-220ENST00000561381 ENKD1Q9H0I2 346 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 DPH5Q9H2P9 285 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 EHD1Q9H4M9 534 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 COPS7BQ9H9Q2 264 aaPredicted RBP10.8□□□□□ -0.68
USP3-220ENST00000561381 GRPEL1Q9HAV7 217 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 SAYSD1Q9NPB0 183 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 TIMMDC1Q9NPL8 285 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 HPF1Q9NWY4 346 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 NSMCE4AQ9NXX6 385 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 CD274Q9NZQ7 290 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 MYOTQ9UBF9 498 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 PTBP2Q9UKA9 531 aaKnown RBP10.8□□□□□ -0.68
USP3-220ENST00000561381 CLCA3PQ9Y6N3 262 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 CCDC168Q8NDH2 2452 aa10.8□□□□□ -0.68
USP3-220ENST00000561381 INTS1Q8N201 2190 aaKnown RBP10.79□□□□□ -0.68
USP3-220ENST00000561381 TCRBV9S1A1TA0A576 114 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 NKX2-6A6NCS4 301 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 CCNT2O60583 730 aaKnown RBP10.79□□□□□ -0.68
USP3-220ENST00000561381 FAM155BO75949 473 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 C1QAP02745 245 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 STMN1P16949 149 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 PAFAH1B1P43034 410 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 MSH2P43246 934 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 HK2P52789 917 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 PPIAP62937 165 aaKnown RBP10.79□□□□□ -0.68
USP3-220ENST00000561381 IRF8Q02556 426 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 CBLBQ13191 982 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 CHIT1Q13231 466 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 ZNF750Q32MQ0 723 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 EMC4Q5J8M3 183 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 ARHGAP11AQ6P4F7 1023 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 HSDL2Q6YN16 418 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 MEX3BQ6ZN04 569 aaKnown RBP10.79□□□□□ -0.68
USP3-220ENST00000561381 TMEM132CQ8N3T6 1108 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 PDPRQ8NCN5 879 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 KIAA1191Q96A73 305 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 C14orf79Q96F83 325 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 TSPAN17Q96FV3 270 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 SCYL1Q96KG9 808 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 GPR22Q99680 433 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 RBBP8Q99708 897 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 CPNE1Q99829 537 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 MAPKAP1Q9BPZ7 522 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 UCK2Q9BZX2 261 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 CNOT10Q9H9A5 744 aaKnown RBP10.79□□□□□ -0.68
USP3-220ENST00000561381 COQ3Q9NZJ6 369 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 VTI1BQ9UEU0 232 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 RNF6Q9Y252 685 aa10.79□□□□□ -0.68
USP3-220ENST00000561381 MRPS33Q9Y291 106 aaKnown RBP10.79□□□□□ -0.68
USP3-220ENST00000561381 FAM159BA6NKW6 160 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 FAM90A27PA6NNH2 459 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 C17orf105B2RV13 164 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 NPIPA2E9PIF3 369 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 NPIPA3F8WFD2 350 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 SAP18O00422 153 aaKnown RBP10.78□□□□□ -0.68
USP3-220ENST00000561381 ETHE1O95571 254 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 TGFB1P01137 390 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 TNNI3P19429 210 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 ATP5A1P25705 553 aaKnown RBP10.78□□□□□ -0.68
USP3-220ENST00000561381 GP5P40197 560 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 GPX6P59796 221 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 ATP6V0D1P61421 351 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 PLGLB1Q02325 96 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms