RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ZFP41Q8N8Y5 198 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 HJURPQ8NCD3 748 aaPredicted RBP15.76■□□□□ 0.11
TPM1-228ENST00000560975 VPS37AQ8NEZ2 397 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 KCTD7Q96MP8 289 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 C1QTNF7Q9BXJ2 289 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 B3GNT4Q9C0J1 378 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 C12orf10Q9HB07 376 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 FAM8A1Q9UBU6 413 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 ORC5O43913 435 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 B4GALT3O60512 393 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 PRPH2P23942 346 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 ACRV1P26436 265 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 CD52P31358 61 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 XCR1P46094 333 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 ATN1P54259 1190 aaPredicted RBP15.76■□□□□ 0.11
TPM1-228ENST00000560975 CLDN20P56880 219 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 MLLT11Q13015 90 aaPredicted RBP15.76■□□□□ 0.11
TPM1-228ENST00000560975 BOP1Q14137 746 aaKnown RBP15.76■□□□□ 0.11
TPM1-228ENST00000560975 OR2G6Q5TZ20 316 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 C1orf52Q8N6N3 182 aaKnown RBP15.76■□□□□ 0.11
TPM1-228ENST00000560975 CLDN22Q8N7P3 220 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 DNAJA4Q8WW22 397 aaPredicted RBP15.76■□□□□ 0.11
TPM1-228ENST00000560975 AKAP1Q92667 903 aaKnown RBP eCLIP15.76■□□□□ 0.11
TPM1-228ENST00000560975 PMEPA1Q969W9 287 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 HYLS1Q96M11 299 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 SEPT5Q99719 369 aaPredicted RBP15.76■□□□□ 0.11
TPM1-228ENST00000560975 PAK6Q9NQU5 681 aaPredicted RBP15.76■□□□□ 0.11
TPM1-228ENST00000560975 NOD1Q9Y239 953 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 TEX51A0A1B0GUA7 166 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 TRBC2A0A5B9 178 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 H3BNC9 293 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 TRIM3O75382 744 aaPredicted RBP15.75■□□□□ 0.11
TPM1-228ENST00000560975 GKP32189 559 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 GJA5P36382 358 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ARF5P84085 180 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 IRF8Q02556 426 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 NCF4Q15080 339 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 SPDYE7PQ495Y7 208 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ZNF628Q5EBL2 1059 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 GCNT6Q5T4J0 391 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 NCEH1Q6PIU2 408 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 CASP12Q6UXS9 341 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 LRRC70Q7Z2Q7 622 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ZNF467Q7Z7K2 595 aaPredicted RBP15.75■□□□□ 0.11
TPM1-228ENST00000560975 CDH24Q86UP0 819 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ESX1Q8N693 406 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ZFYVE1Q9HBF4 777 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ZNF224Q9NZL3 707 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 PRG3Q9Y2Y8 225 aaPredicted RBP15.75■□□□□ 0.11
TPM1-228ENST00000560975 TRPV2Q9Y5S1 764 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.75■□□□□ 0.11
TPM1-228ENST00000560975 PROM1O43490 865 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ACSL4O60488 711 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 GBAP04062 536 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 GSTM1P09488 218 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ANXA4P09525 319 aaPredicted RBP15.75■□□□□ 0.11
TPM1-228ENST00000560975 HIST1H2AGP0C0S8 130 aaPredicted RBP15.75■□□□□ 0.11
TPM1-228ENST00000560975 HIST1H2ADP20671 130 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ETV5P41161 510 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 AVPR1BP47901 424 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 SOX9P48436 509 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ETV1P50549 477 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 PER3P56645 1201 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 TAGLNQ01995 201 aaKnown RBP15.75■□□□□ 0.11
TPM1-228ENST00000560975 RBBP4Q09028 425 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ZNF177Q13360 481 aaPredicted RBP15.75■□□□□ 0.11
TPM1-228ENST00000560975 DNAJC5GQ8N7S2 189 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 PROKR2Q8NFJ6 384 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 ZNF431Q8TF32 576 aaPredicted RBP15.75■□□□□ 0.11
TPM1-228ENST00000560975 HIST1H2AHQ96KK5 128 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 HIST1H2AJQ99878 128 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 H2AFJQ9BTM1 129 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 TVP23BQ9NYZ1 205 aa15.75■□□□□ 0.11
TPM1-228ENST00000560975 GNG14A0A1W2PPG7 69 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 C2orf78A6NCI8 922 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 GTPBP1O00178 669 aaKnown RBP15.74■□□□□ 0.11
TPM1-228ENST00000560975 CASKO14936 926 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 KPNA5O15131 536 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 HCN1O60741 890 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 RFPL3O75679 317 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 ETHE1O95571 254 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 CD22P20273 847 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 GSTM5P46439 218 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 PTPN5P54829 565 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 RHOAP61586 193 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 HBA1P69905 142 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 FCN2Q15485 313 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 L3MBTL4Q8NA19 623 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 DUSP18Q8NEJ0 188 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 ZNF680Q8NEM1 530 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 GEMIN6Q8WXD5 167 aaKnown RBP15.74■□□□□ 0.11
TPM1-228ENST00000560975 SLC35A5Q9BS91 424 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 MGAT4AQ9UM21 535 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 CORO2BQ9UQ03 480 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 OR5K3A6NET4 321 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 MGAT4DA6NG13 374 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 TSPAN4O14817 238 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 LGI1O95970 557 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 FAM157BP0CG42 384 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 CCR7P32248 378 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms