RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 RAB10P61026 200 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 ELAVL1Q15717 326 aaKnown RBP16.63■□□□□ 0.25
RPL28-210ENST00000560583 CYS1Q717R9 158 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 CMC1Q7Z7K0 106 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 ZNF295-AS1Q8N0V1 137 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 MMGT1Q8N4V1 131 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 TMEM156Q8N614 296 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 ZNF321PQ8N8H1 164 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 C16orf52Q8NHV5 167 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 SREK1Q8WXA9 508 aaKnown RBP16.63■□□□□ 0.25
RPL28-210ENST00000560583 MTFMTQ96DP5 389 aaKnown RBP16.63■□□□□ 0.25
RPL28-210ENST00000560583 MS4A8Q9BY19 250 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 COPS7BQ9H9Q2 264 aaPredicted RBP16.63■□□□□ 0.25
RPL28-210ENST00000560583 PLSCR2Q9NRY7 297 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 CD274Q9NZQ7 290 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 MRPS33Q9Y291 106 aaKnown RBP16.63■□□□□ 0.25
RPL28-210ENST00000560583 HRH3Q9Y5N1 445 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 AKAP9Q99996 3911 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 TACC2O95359 2948 aa16.63■□□□□ 0.25
RPL28-210ENST00000560583 A0A0G2JMM0 328 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 A0A1B0GTH9 108 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 A0A1W2PPB8 328 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 A0A1W2PRS3 328 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 PINLYPA6NC86 204 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 KIR3DP1A8MWS1 328 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 E9PLN8 166 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 RTCAO00442 366 aaKnown RBP16.62■□□□□ 0.25
RPL28-210ENST00000560583 OR2J2O76002 312 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 PHBP35232 272 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 SPRP35270 261 aaPredicted RBP16.62■□□□□ 0.25
RPL28-210ENST00000560583 KIR3DL1P43629 444 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 SSR4P51571 173 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 CHIT1Q13231 466 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 SLMAPQ14BN4 828 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 EFTUD2Q15029 972 aaKnown RBP eCLIP16.62■□□□□ 0.254e-6■■■□□ 17.1
RPL28-210ENST00000560583 TBCCQ15814 346 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 KBTBD12Q3ZCT8 623 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 LRRC70Q7Z2Q7 622 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 MARVELD2Q8N4S9 558 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 CEP112Q8N8E3 955 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 FAM57AQ8TBR7 257 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 FBF1Q8TES7 1133 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 ZNF473Q8WTR7 871 aaKnown RBP16.62■□□□□ 0.25
RPL28-210ENST00000560583 PTPMT1Q8WUK0 201 aaPredicted RBP16.62■□□□□ 0.25
RPL28-210ENST00000560583 IFT81Q8WYA0 676 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 ATOH8Q96SQ7 321 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 MAPKAP1Q9BPZ7 522 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 VKORC1Q9BQB6 163 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 CD244Q9BZW8 370 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 ALG9Q9H6U8 611 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 RUBCNLQ9H714 662 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 RNF112Q9ULX5 631 aa16.62■□□□□ 0.25
RPL28-210ENST00000560583 YARS2Q9Y2Z4 477 aaKnown RBP16.62■□□□□ 0.25
RPL28-210ENST00000560583 KLRC4-KLRK1H3BQV0 150 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 PRRG2O14669 202 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 CCNT2O60583 730 aaKnown RBP16.61■□□□□ 0.25
RPL28-210ENST00000560583 ZNF354AO60765 605 aaPredicted RBP16.61■□□□□ 0.25
RPL28-210ENST00000560583 CTNSO60931 367 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 ZFAND5O76080 213 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 OR6B1O95007 311 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 SCELO95171 688 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 CASP2P42575 452 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 MSH2P43246 934 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 IRF8Q02556 426 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 NAB1Q13506 487 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 GRTP1Q5TC63 336 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 RAPH1Q70E73 1250 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 ISCA2Q86U28 154 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 CD163Q86VB7 1156 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 ACBD4Q8NC06 268 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 NOA1Q8NC60 698 aaKnown RBP16.61■□□□□ 0.25
RPL28-210ENST00000560583 PSD4Q8NDX1 1056 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 OR52N2Q8NGI0 321 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 UBTD2Q8WUN7 234 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 KCNC2Q96PR1 638 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 RASL10BQ96S79 203 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 CCDC77Q9BR77 488 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 LYRM4Q9HD34 91 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 IGSF5Q9NSI5 407 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 NUDT4Q9NZJ9 180 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 MYOTQ9UBF9 498 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 HCFC1P51610 2035 aa16.61■□□□□ 0.25
RPL28-210ENST00000560583 PHF3Q92576 2039 aaKnown RBP16.61■□□□□ 0.25
RPL28-210ENST00000560583 DNAJC13O75165 2243 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 UBXN8O00124 270 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 CDC40O60508 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
RPL28-210ENST00000560583 LDB3O75112 727 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 ATP5A1P25705 553 aaKnown RBP16.6■□□□□ 0.25
RPL28-210ENST00000560583 HPDP32754 393 aaPredicted RBP16.6■□□□□ 0.25
RPL28-210ENST00000560583 PTGS2P35354 604 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 SOX3P41225 446 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 HK2P52789 917 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 ID2Q02363 134 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 LAPTM5Q13571 262 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 UAP1Q16222 522 aaPredicted RBP16.6■□□□□ 0.25
RPL28-210ENST00000560583 GLE1Q53GS7 698 aaKnown RBP16.6■□□□□ 0.25
RPL28-210ENST00000560583 PAGE2BQ5JRK9 111 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 LAS2Q8IYD9 372 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 TMEM132CQ8N3T6 1108 aa16.6■□□□□ 0.25
RPL28-210ENST00000560583 ACOT4Q8N9L9 421 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms