RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 CPN2P22792 545 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 CERS1P27544 350 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 PTPN6P29350 595 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 AVPR1BP47901 424 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 ALDH9A1P49189 494 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 SEPHS1P49903 392 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 SLC7A2P52569 658 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 ARSFP54793 590 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 LIM2P55344 173 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 EEFSECP57772 596 aaKnown RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 ELF3P78545 371 aaPredicted RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 TNFRSF17Q02223 184 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 ACY1Q03154 408 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 TCF15Q12870 199 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 TRAP1Q12931 704 aaKnown RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 CSRP2Q16527 193 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 MUM1Q2TAK8 710 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 DEFB134Q4QY38 66 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 SNAP47Q5SQN1 464 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 SLC48A1Q6P1K1 146 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 TLDC1Q6P9B6 456 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 ZNF574Q6ZN55 896 aaPredicted RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 BPHLQ86WA6 291 aaPredicted RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 TICAM1Q8IUC6 712 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 SLC15A3Q8IY34 581 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 KIAA2013Q8IYS2 634 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 GPR135Q8IZ08 494 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 EFCAB3Q8N7B9 438 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 AMER3Q8N944 861 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 FAM13CQ8NE31 585 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 DNAJB14Q8TBM8 379 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 NUDT8Q8WV74 236 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 TMEM125Q96AQ2 219 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 ZNF501Q96CX3 271 aaPredicted RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 MVB12AQ96EY5 273 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 ZBED6CLQ96FA7 236 aaPredicted RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 CDC6Q99741 560 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 MAPKAP1Q9BPZ7 522 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 NUDT22Q9BRQ3 303 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 MUC13Q9H3R2 512 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 IL1RL2Q9HB29 575 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 ACSS1Q9NUB1 689 aaPredicted RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 GIMAP4Q9NUV9 329 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 TAS2R9Q9NYW1 312 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 KCMF1Q9P0J7 381 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 TMEM9Q9P0T7 183 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 SLAMF8Q9P0V8 285 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 SUCOQ9UBS9 1254 aaKnown RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 CD300AQ9UGN4 299 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 SLC7A8Q9UHI5 535 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 SERTAD3Q9UJW9 196 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 FBXW2Q9UKT8 454 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 VPS4AQ9UN37 437 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 CORO2BQ9UQ03 480 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 NAALAD2Q9Y3Q0 740 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 ATG4BQ9Y4P1 393 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 PCDHB14Q9Y5E9 798 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 MUC6Q6W4X9 2439 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 IGHV5-10-1A0A0J9YXX1 117 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 A0A1W2PR48 441 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 A0A1W2PRB8 838 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 A8MU76 341 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 EVPLLA8MZ36 301 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 MYO1GB0I1T2 1018 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 TMEM150CB9EJG8 249 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 D6RAR5 112 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 H3BMH7 237 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 OR2B3O76000 313 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 STAMBPO95630 424 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 AIFM1O95831 613 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 LMNAP02545 664 aaKnown RBP8.14□□□□□ -1.11
TRAF3-209ENST00000560463 CD59P13987 128 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 NTSP30990 170 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 NBL1P41271 181 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 MANFP55145 182 aaKnown RBP8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ITGA1P56199 1179 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 PCBP4P57723 403 aaKnown RBP8.14□□□□□ -1.11
TRAF3-209ENST00000560463 RAB38P57729 211 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 SPEM2Q0P670 501 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 BNIP2Q12982 314 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ILKQ13418 452 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 RUNX2Q13950 521 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 CEACAM7Q14002 265 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 SPIDRQ14159 915 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 TRIM25Q14258 630 aaKnown RBP8.14□□□□□ -1.11
TRAF3-209ENST00000560463 CAPRIN1Q14444 709 aaKnown RBP8.14□□□□□ -1.11
TRAF3-209ENST00000560463 SF3A2Q15428 464 aaKnown RBP8.14□□□□□ -1.11
TRAF3-209ENST00000560463 CEBPEQ15744 281 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ZNF385BQ569K4 471 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 OR52E8Q6IFG1 317 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ANKRD26P1Q6NSI1 321 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 RIPOR1Q6ZS17 1223 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ANKRD46Q86W74 232 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 PDSS2Q86YH6 399 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 HPS6Q86YV9 775 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 NAXDQ8IW45 347 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 CA13Q8N1Q1 262 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 C7orf57Q8NEG2 295 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 PRSS33Q8NF86 280 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 TNIP2Q8NFZ5 429 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms